Protein Family : DNA topoisomerase, type IA, core 123426817

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  88

88 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
123748 (1 of 1) KOG1956 - DNA topoisomerase III alpha S. moellendorffii v1.0 2388   scaffold_73: 458341-460728
28226.t000047 (1 of 1) PTHR11390//PTHR11390:SF27 - PROKARYOTIC DNA TOPOISOMERASE // DNA TOPOISOMERASE R. communis v0.1 13133   28226: 210621-223753
Cucsa.311140 (1 of 1) KOG1956 - DNA topoisomerase III alpha C. sativus v1.0 17045   scaffold02995: 794083-811127
orange1.1g001100m.g (1 of 1) PTHR11390:SF27 - DNA TOPOISOMERASE C. sinensis v1.1 12422   scaffold00025: 103196-115617
AT4G31210 (1 of 1) PTHR11390//PTHR11390:SF27 - PROKARYOTIC DNA TOPOISOMERASE // DNA TOPOISOMERASE A. thaliana TAIR10 7583   Chr4: 15165156-15172738
Thhalv10024242m.g (1 of 1) PTHR11390:SF27 - DNA TOPOISOMERASE E. salsugineum v1.0 7378   scaffold_1: 3706444-3713821
Ciclev10007345m.g (1 of 1) PTHR11390:SF27 - DNA TOPOISOMERASE C. clementina v1.0 11850   scaffold_1: 137166-149015
Lus10020186.g (1 of 1) PF01131//PF01396//PF01751//PF13368 - DNA topoisomerase (Topoisom_bac) // Topoisomerase DNA binding C4 zinc finger (zf-C4_Topoisom) // Toprim domain (Toprim) // Topoisomerase C-terminal repeat (Toprim_C_rpt) L. usitatissimum v1.0 8878   scaffold454: 505298-514175
Lus10026991.g (1 of 3) PTHR11390:SF27 - DNA TOPOISOMERASE L. usitatissimum v1.0 2158   scaffold651: 992874-995031
Gorai.010G125500 (1 of 1) PTHR11390:SF27 - DNA TOPOISOMERASE G. raimondii v2.1 19525   Chr10: 26102638-26122162
Genemark1.1604_g (1 of 1) PTHR11390:SF27 - DNA TOPOISOMERASE C. subellipsoidea C-169 v2.0 7504   scaffold_3: 790800-798303
MicpuC2.EuGene.0000050018 (1 of 1) PTHR11390:SF27 - DNA TOPOISOMERASE M. pusilla CCMP1545 v3.0 3732   scaffold_5: 40458-44189
EuGene.0600010703 (1 of 1) PTHR11390:SF27 - DNA TOPOISOMERASE M. sp RCC299 v3.0 3684   Chr_06: 1394892-1398575
e_gwEuk.6.36.1 (1 of 1) PTHR11390:SF27 - DNA TOPOISOMERASE O. lucimarinus v2.0 2601   Chr_6: 361938-364538
Thecc1EG036747 (1 of 1) PTHR11390//PTHR11390:SF27 - PROKARYOTIC DNA TOPOISOMERASE // DNA TOPOISOMERASE T. cacao v1.1 13216   scaffold_9: 55266-68481
Migut.C00355 (1 of 2) PTHR11390:SF27 - DNA TOPOISOMERASE M. guttatus v2.0 5927   scaffold_3: 9136556-9142482
Araha.3539s0018 (1 of 2) PTHR11390:SF27 - DNA TOPOISOMERASE A. halleri v1.1 7552   Scaffold3539: 88969-96520
Araha.11756s0023 (1 of 1) KOG1957 - DNA topoisomerase III beta A. halleri v1.1 2568   Scaffold11756: 33671-36238
Cagra.0380s0005 (1 of 1) PTHR11390:SF27 - DNA TOPOISOMERASE C. grandiflora v1.1 7733   Scaffold380: 12020-19752
Glyma.14G137100 (1 of 1) PF01131//PF01396//PF01751//PF13368 - DNA topoisomerase (Topoisom_bac) // Topoisomerase DNA binding C4 zinc finger (zf-C4_Topoisom) // Toprim domain (Toprim) // Topoisomerase C-terminal repeat (Toprim_C_rpt) G. max Wm82.a2.v1 38850   Chr14: 24573699-24612548
Glyma.17G196500 (1 of 3) PTHR11390:SF27 - DNA TOPOISOMERASE G. max Wm82.a2.v1 6904   Chr17: 30748563-30755466
Brara.K01665 (1 of 2) PTHR11390:SF27 - DNA TOPOISOMERASE B. rapa FPsc v1.3 6567   Scaffold81280: 198466-205032
Brara.A00644 (1 of 2) PTHR11390:SF27 - DNA TOPOISOMERASE B. rapa FPsc v1.3 6953   A01: 3185197-3192149
Bostr.7867s0978 (1 of 1) PTHR11390:SF27 - DNA TOPOISOMERASE B. stricta v1.2 7758   Scaffold7867: 4981701-4989458
Cre10.g442850 (1 of 1) K03168 - DNA topoisomerase I [EC:5.99.1.2] (topA) C. reinhardtii v5.6 TOP1A 8681   chromosome_10: 3224988-3233668
Medtr1g009315 (1 of 3) KOG1956 - DNA topoisomerase III alpha M. truncatula Mt4.0v1 20403   chr1: 1275993-1296395
Medtr2g066840 (1 of 5) PTHR11390:SF27 - DNA TOPOISOMERASE M. truncatula Mt4.0v1 2197   chr2: 27945165-27947361
Medtr0245s0010 (1 of 3) KOG1956 - DNA topoisomerase III alpha M. truncatula Mt4.0v1 22741   scaffold0245: 1565-24305
SapurV1A.0263s0110 (1 of 1) PTHR11390//PTHR11390:SF27 - PROKARYOTIC DNA TOPOISOMERASE // DNA TOPOISOMERASE S. purpurea v1.0 11012   chr06: 25676224-25687235
evm_27.TU.AmTr_v1.0_scaffold00006.171 (1 of 1) PTHR11390:SF27 - DNA TOPOISOMERASE A. trichopoda v1.0 40056   AmTr_v1.0_scaffold00006: 6699386-6739441

88 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
123748 S. moellendorffii v1.0 123426817 DNA topoisomerase, type IA, core 1 5275 Viridiplantae
28226.m000877 R. communis v0.1 123426817 DNA topoisomerase, type IA, core 1 5275 Viridiplantae
Cucsa.311140.1 C. sativus v1.0 123426817 DNA topoisomerase, type IA, core 1 5275 Viridiplantae
orange1.1g001100m C. sinensis v1.1 123426817 DNA topoisomerase, type IA, core 1 5275 Viridiplantae
AT4G31210.1 A. thaliana TAIR10 123426817 DNA topoisomerase, type IA, core 1 5275 Viridiplantae
Thhalv10024242m E. salsugineum v1.0 123426817 DNA topoisomerase, type IA, core 1 5275 Viridiplantae
Ciclev10007345m C. clementina v1.0 123426817 DNA topoisomerase, type IA, core 1 5275 Viridiplantae
Lus10020186 L. usitatissimum v1.0 123426817 DNA topoisomerase, type IA, core 2 5275 Viridiplantae
Lus10026991 L. usitatissimum v1.0 123426817 DNA topoisomerase, type IA, core 2 5275 Viridiplantae
Gorai.010G125500.1 G. raimondii v2.1 123426817 DNA topoisomerase, type IA, core 1 5275 Viridiplantae
60793 C. subellipsoidea C-169 v2.0 123426817 DNA topoisomerase, type IA, core 1 5275 Viridiplantae
57713 M. pusilla CCMP1545 v3.0 123426817 DNA topoisomerase, type IA, core 1 5275 Viridiplantae
59701 M. sp RCC299 v3.0 123426817 DNA topoisomerase, type IA, core 1 5275 Viridiplantae
41359 O. lucimarinus v2.0 123426817 DNA topoisomerase, type IA, core 1 5275 Viridiplantae
Thecc1EG036747t3 T. cacao v1.1 123426817 DNA topoisomerase, type IA, core 1 5275 Viridiplantae
Migut.C00355.1.p M. guttatus v2.0 123426817 DNA topoisomerase, type IA, core 1 5275 Viridiplantae
Araha.11756s0023.1.p A. halleri v1.1 123426817 DNA topoisomerase, type IA, core 2 5275 Viridiplantae
Araha.3539s0018.1.p A. halleri v1.1 123426817 DNA topoisomerase, type IA, core 2 5275 Viridiplantae
Cagra.0380s0005.1.p C. grandiflora v1.1 123426817 DNA topoisomerase, type IA, core 1 5275 Viridiplantae
Glyma.14G137100.1.p G. max Wm82.a2.v1 123426817 DNA topoisomerase, type IA, core 2 5275 Viridiplantae
Glyma.17G196500.1.p G. max Wm82.a2.v1 123426817 DNA topoisomerase, type IA, core 2 5275 Viridiplantae
Brara.K01665.1.p B. rapa FPsc v1.3 123426817 DNA topoisomerase, type IA, core 2 5275 Viridiplantae
Brara.A00644.1.p B. rapa FPsc v1.3 123426817 DNA topoisomerase, type IA, core 2 5275 Viridiplantae
Bostr.7867s0978.1.p B. stricta v1.2 123426817 DNA topoisomerase, type IA, core 1 5275 Viridiplantae
Cre10.g442850.t1.1 C. reinhardtii v5.6 123426817 DNA topoisomerase, type IA, core 1 5275 Viridiplantae
Medtr2g066840.1 M. truncatula Mt4.0v1 123426817 DNA topoisomerase, type IA, core 3 5275 Viridiplantae
Medtr1g009315.1 M. truncatula Mt4.0v1 123426817 DNA topoisomerase, type IA, core 3 5275 Viridiplantae
Medtr0245s0010.2 M. truncatula Mt4.0v1 123426817 DNA topoisomerase, type IA, core 3 5275 Viridiplantae
SapurV1A.0263s0110.1.p S. purpurea v1.0 123426817 DNA topoisomerase, type IA, core 1 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00006.171 A. trichopoda v1.0 123426817 DNA topoisomerase, type IA, core 1 5275 Viridiplantae