Gene : Medtr1g009315 M. truncatula Mt4.0v1
Defline:  (1 of 3) KOG1956 - DNA topoisomerase III alpha Description:  DNA topoisomerase I, bacterial protein
Genomic Order:  177 Name:  ? Medtr1g009315
Secondary Identifier:  ? PAC:31100283
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g009315 0.5kb upstream 0.5kb upstream 20903 true chr1: 1275993-1296895 Medicago truncatula
Medtr1g009315 0.5kb upstream 0.5kb upstream 500 false chr1: 1296396-1296895 Medicago truncatula
Medtr1g009315 0.5kb downstream 0.5kb downstream 20903 true chr1: 1275493-1296395 Medicago truncatula
Medtr1g009315 0.5kb downstream 0.5kb downstream 500 false chr1: 1275493-1275992 Medicago truncatula
Medtr1g009315 1.0kb upstream 1.0kb upstream 21403 true chr1: 1275993-1297395 Medicago truncatula
Medtr1g009315 1.0kb upstream 1.0kb upstream 1000 false chr1: 1296396-1297395 Medicago truncatula
Medtr1g009315 1.0kb downstream 1.0kb downstream 21403 true chr1: 1274993-1296395 Medicago truncatula
Medtr1g009315 1.0kb downstream 1.0kb downstream 1000 false chr1: 1274993-1275992 Medicago truncatula
Medtr1g009315 2.0kb upstream 2.0kb upstream 22403 true chr1: 1275993-1298395 Medicago truncatula
Medtr1g009315 2.0kb upstream 2.0kb upstream 2000 false chr1: 1296396-1298395 Medicago truncatula
Medtr1g009315 2.0kb downstream 2.0kb downstream 22403 true chr1: 1273993-1296395 Medicago truncatula
Medtr1g009315 2.0kb downstream 2.0kb downstream 2000 false chr1: 1273993-1275992 Medicago truncatula
Medtr1g009315 5.0kb upstream 5.0kb upstream 25403 true chr1: 1275993-1301395 Medicago truncatula
Medtr1g009315 5.0kb upstream 5.0kb upstream 5000 false chr1: 1296396-1301395 Medicago truncatula
Medtr1g009315 5.0kb downstream 5.0kb downstream 25403 true chr1: 1270993-1296395 Medicago truncatula
Medtr1g009315 5.0kb downstream 5.0kb downstream 5000 false chr1: 1270993-1275992 Medicago truncatula
Medtr1g009315 10.0kb upstream 10.0kb upstream 30403 true chr1: 1275993-1306395 Medicago truncatula
Medtr1g009315 10.0kb upstream 10.0kb upstream 10000 false chr1: 1296396-1306395 Medicago truncatula
Medtr1g009315 10.0kb downstream 10.0kb downstream 30403 true chr1: 1265993-1296395 Medicago truncatula
Medtr1g009315 10.0kb downstream 10.0kb downstream 10000 false chr1: 1265993-1275992 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301575 5265 Fabidae View MSA
124062763 5270 Rosid View MSA
123739329 5271 Pentapetalae View MSA
122792755 5272 Eudicot View MSA
122047422 5273 Angiosperm View MSA
121351439 5274 Embryophyte View MSA
123426817 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.017     Low  
cufflinks 0.067     Low  
cufflinks 0.107        
cufflinks 0.002     Low Low
cufflinks 0.23       High
cufflinks 0.011     Low  
cufflinks 0.01     Low  
cufflinks 0.108        
cufflinks 0.01     Low  

0 Strain