Gene : LSM2 C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g441950 Defline:  (1 of 1) K12621 - U6 snRNA-associated Sm-like protein LSm2 (LSM2)
Genomic Order:  525 Name:  ? Cre10.g441950
Secondary Identifier:  ? PAC:30790316
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g441950 0.5kb upstream 0.5kb upstream 2326 true chromosome_10: 3153530-3155855 Chlamydomonas reinhardtii
Cre10.g441950 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 3155356-3155855 Chlamydomonas reinhardtii
Cre10.g441950 0.5kb downstream 0.5kb downstream 2326 true chromosome_10: 3153030-3155355 Chlamydomonas reinhardtii
Cre10.g441950 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 3153030-3153529 Chlamydomonas reinhardtii
Cre10.g441950 1.0kb upstream 1.0kb upstream 2826 true chromosome_10: 3153530-3156355 Chlamydomonas reinhardtii
Cre10.g441950 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 3155356-3156355 Chlamydomonas reinhardtii
Cre10.g441950 1.0kb downstream 1.0kb downstream 2826 true chromosome_10: 3152530-3155355 Chlamydomonas reinhardtii
Cre10.g441950 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 3152530-3153529 Chlamydomonas reinhardtii
Cre10.g441950 2.0kb upstream 2.0kb upstream 3826 true chromosome_10: 3153530-3157355 Chlamydomonas reinhardtii
Cre10.g441950 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 3155356-3157355 Chlamydomonas reinhardtii
Cre10.g441950 2.0kb downstream 2.0kb downstream 3826 true chromosome_10: 3151530-3155355 Chlamydomonas reinhardtii
Cre10.g441950 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 3151530-3153529 Chlamydomonas reinhardtii
Cre10.g441950 5.0kb upstream 5.0kb upstream 6826 true chromosome_10: 3153530-3160355 Chlamydomonas reinhardtii
Cre10.g441950 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 3155356-3160355 Chlamydomonas reinhardtii
Cre10.g441950 5.0kb downstream 5.0kb downstream 6826 true chromosome_10: 3148530-3155355 Chlamydomonas reinhardtii
Cre10.g441950 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 3148530-3153529 Chlamydomonas reinhardtii
Cre10.g441950 10.0kb upstream 10.0kb upstream 11826 true chromosome_10: 3153530-3165355 Chlamydomonas reinhardtii
Cre10.g441950 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 3155356-3165355 Chlamydomonas reinhardtii
Cre10.g441950 10.0kb downstream 10.0kb downstream 11826 true chromosome_10: 3143530-3155355 Chlamydomonas reinhardtii
Cre10.g441950 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 3143530-3153529 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108474 5260 Chlorophyte View MSA
123425045 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.694     High  
cufflinks 32.045     High  
cufflinks 34.813     High  
cufflinks 24.865     High  
cufflinks 31.093     High  
cufflinks 32.613     High  
cufflinks 33.603     High  
cufflinks 26.652     High  
cufflinks 29.114     High  
cufflinks 44.092     High High
cufflinks 16.319     High Low
cufflinks 23.819     High  
cufflinks 36.519     High High
cufflinks 34.669     High  
cufflinks 21.274     High  
cufflinks 29.107     High  
cufflinks 15.112     High Low
cufflinks 30.863     High  
cufflinks 28.369     High  
cufflinks 27.065     High  
cufflinks 21.643     High  
cufflinks 15.351     High Low
cufflinks 32.314     High  
cufflinks 20.021     High  
cufflinks 15.441     High Low
cufflinks 41.1584 4.46982 77.847 High  
cufflinks 19.03 4.3456 33.7144    
cufflinks 47.1905 0.0 94.9357 High  
cufflinks 33.526 4.16095 62.891 High Low
cufflinks 40.4538 7.74534 73.1622 High  

0 Strain