Gene : SRR27 C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g421900 Defline:  (1 of 4) 1.4.3.13 - Protein-lysine 6-oxidase / Lysyl oxidase
Genomic Order:  104 Name:  ? Cre10.g421900
Secondary Identifier:  ? PAC:30790193
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g421900 0.5kb upstream 0.5kb upstream 20026 true chromosome_10: 603836-623861 Chlamydomonas reinhardtii
Cre10.g421900 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 623362-623861 Chlamydomonas reinhardtii
Cre10.g421900 0.5kb downstream 0.5kb downstream 20026 true chromosome_10: 603336-623361 Chlamydomonas reinhardtii
Cre10.g421900 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 603336-603835 Chlamydomonas reinhardtii
Cre10.g421900 1.0kb upstream 1.0kb upstream 20526 true chromosome_10: 603836-624361 Chlamydomonas reinhardtii
Cre10.g421900 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 623362-624361 Chlamydomonas reinhardtii
Cre10.g421900 1.0kb downstream 1.0kb downstream 20526 true chromosome_10: 602836-623361 Chlamydomonas reinhardtii
Cre10.g421900 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 602836-603835 Chlamydomonas reinhardtii
Cre10.g421900 2.0kb upstream 2.0kb upstream 21526 true chromosome_10: 603836-625361 Chlamydomonas reinhardtii
Cre10.g421900 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 623362-625361 Chlamydomonas reinhardtii
Cre10.g421900 2.0kb downstream 2.0kb downstream 21526 true chromosome_10: 601836-623361 Chlamydomonas reinhardtii
Cre10.g421900 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 601836-603835 Chlamydomonas reinhardtii
Cre10.g421900 5.0kb upstream 5.0kb upstream 24526 true chromosome_10: 603836-628361 Chlamydomonas reinhardtii
Cre10.g421900 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 623362-628361 Chlamydomonas reinhardtii
Cre10.g421900 5.0kb downstream 5.0kb downstream 24526 true chromosome_10: 598836-623361 Chlamydomonas reinhardtii
Cre10.g421900 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 598836-603835 Chlamydomonas reinhardtii
Cre10.g421900 10.0kb upstream 10.0kb upstream 29526 true chromosome_10: 603836-633361 Chlamydomonas reinhardtii
Cre10.g421900 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 623362-633361 Chlamydomonas reinhardtii
Cre10.g421900 10.0kb downstream 10.0kb downstream 29526 true chromosome_10: 593836-623361 Chlamydomonas reinhardtii
Cre10.g421900 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 593836-603835 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124077259 5260 Chlorophyte View MSA
123395279 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.306       Low
cufflinks 0.597        
cufflinks 0.804        
cufflinks 0.894        
cufflinks 0.443        
cufflinks 0.483        
cufflinks 0.825        
cufflinks 0.778        
cufflinks 0.314       Low
cufflinks 0.27       Low
cufflinks 1.019       High
cufflinks 0.857        
cufflinks 0.249       Low
cufflinks 0.49        
cufflinks 0.677        
cufflinks 0.546        
cufflinks 0.902        
cufflinks 0.707        
cufflinks 0.218       Low
cufflinks 0.974        
cufflinks 0.64        
cufflinks 0.647        
cufflinks 1.053       High
cufflinks 1.048       High
cufflinks 0.926        
cufflinks 1.17033 0.197277 2.14339    
cufflinks 0.292698 0.0 0.625244 Low  
cufflinks 3.8617 0.0 7.78444   High
cufflinks 3.43351 0.266341 6.60067    
cufflinks 2.83548 0.5392 5.13177    

0 Strain