Gene : Cre10.g423600 C. reinhardtii v5.6
Defline:  (1 of 1) KOG0265//KOG0271//KOG0278//KOG0279//KOG0286//KOG0313//KOG0315//KOG0318//KOG0645//KOG1332//KOG1407 - U5 snRNP-specific protein-like factor and related proteins // Notchless-like WD40 repeat-containing protein // Serine/threonine kinase receptor-associated protein // G protein beta subunit-like protein // G-protein beta subunit // Microtubule binding protein YTM1 (contains WD40 repeats) // G-protein beta subunit-like protein (contains WD40 repeats) // WD40 repeat stress protein/actin interacting protein // WD40 repeat protein // Vesicle coat complex COPII, subunit SEC13 // WD40 repeat protein Genomic Order:  141
Name:  ? Cre10.g423600 Secondary Identifier:  ? PAC:30789739
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g423600 0.5kb upstream 0.5kb upstream 12146 true chromosome_10: 835435-847580 Chlamydomonas reinhardtii
Cre10.g423600 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 847081-847580 Chlamydomonas reinhardtii
Cre10.g423600 0.5kb downstream 0.5kb downstream 12146 true chromosome_10: 834935-847080 Chlamydomonas reinhardtii
Cre10.g423600 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 834935-835434 Chlamydomonas reinhardtii
Cre10.g423600 1.0kb upstream 1.0kb upstream 12646 true chromosome_10: 835435-848080 Chlamydomonas reinhardtii
Cre10.g423600 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 847081-848080 Chlamydomonas reinhardtii
Cre10.g423600 1.0kb downstream 1.0kb downstream 12646 true chromosome_10: 834435-847080 Chlamydomonas reinhardtii
Cre10.g423600 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 834435-835434 Chlamydomonas reinhardtii
Cre10.g423600 2.0kb upstream 2.0kb upstream 13646 true chromosome_10: 835435-849080 Chlamydomonas reinhardtii
Cre10.g423600 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 847081-849080 Chlamydomonas reinhardtii
Cre10.g423600 2.0kb downstream 2.0kb downstream 13646 true chromosome_10: 833435-847080 Chlamydomonas reinhardtii
Cre10.g423600 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 833435-835434 Chlamydomonas reinhardtii
Cre10.g423600 5.0kb upstream 5.0kb upstream 16646 true chromosome_10: 835435-852080 Chlamydomonas reinhardtii
Cre10.g423600 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 847081-852080 Chlamydomonas reinhardtii
Cre10.g423600 5.0kb downstream 5.0kb downstream 16646 true chromosome_10: 830435-847080 Chlamydomonas reinhardtii
Cre10.g423600 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 830435-835434 Chlamydomonas reinhardtii
Cre10.g423600 10.0kb upstream 10.0kb upstream 21646 true chromosome_10: 835435-857080 Chlamydomonas reinhardtii
Cre10.g423600 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 847081-857080 Chlamydomonas reinhardtii
Cre10.g423600 10.0kb downstream 10.0kb downstream 21646 true chromosome_10: 825435-847080 Chlamydomonas reinhardtii
Cre10.g423600 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 825435-835434 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124076142 5260 Chlorophyte View MSA
123394261 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.002     Low Low
cufflinks 0.241        
cufflinks 0.228        
cufflinks 0.431       High
cufflinks 0.098     Low  
cufflinks 0.104     Low  
cufflinks 0.277        
cufflinks 0.318        
cufflinks 0.032     Low Low
cufflinks 0.015     Low Low
cufflinks 0.402        
cufflinks 0.216     Low  
cufflinks 0.075     Low  
cufflinks 0.09     Low  
cufflinks 0.318        
cufflinks 0.013     Low Low
cufflinks 0.189        
cufflinks 0.173        
cufflinks 0.078        
cufflinks 0.273        
cufflinks 0.228        
cufflinks 0.059     Low  
cufflinks 0.436       High
cufflinks 0.257        
cufflinks 0.091     Low  
cufflinks 0.0515245 0.0 0.122241 Low Low
cufflinks 0.160054 0.0 0.41484 Low Low
cufflinks 2.18202 0.0 4.54052    
cufflinks 0.396029 0.0 0.798612   High
cufflinks 0.908836 0.0442689 1.7734    

0 Strain