Gene : Cre10.g422500 C. reinhardtii v5.6
Defline:  (1 of 1) PF09113 - Peptide-N-glycosidase F, C terminal (N-glycanase_C) Genomic Order:  118
Name:  ? Cre10.g422500 Secondary Identifier:  ? PAC:30790002
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g422500 0.5kb upstream 0.5kb upstream 6272 true chromosome_10: 706152-712423 Chlamydomonas reinhardtii
Cre10.g422500 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 706152-706651 Chlamydomonas reinhardtii
Cre10.g422500 0.5kb downstream 0.5kb downstream 6272 true chromosome_10: 706652-712923 Chlamydomonas reinhardtii
Cre10.g422500 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 712424-712923 Chlamydomonas reinhardtii
Cre10.g422500 1.0kb upstream 1.0kb upstream 6772 true chromosome_10: 705652-712423 Chlamydomonas reinhardtii
Cre10.g422500 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 705652-706651 Chlamydomonas reinhardtii
Cre10.g422500 1.0kb downstream 1.0kb downstream 6772 true chromosome_10: 706652-713423 Chlamydomonas reinhardtii
Cre10.g422500 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 712424-713423 Chlamydomonas reinhardtii
Cre10.g422500 2.0kb upstream 2.0kb upstream 7772 true chromosome_10: 704652-712423 Chlamydomonas reinhardtii
Cre10.g422500 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 704652-706651 Chlamydomonas reinhardtii
Cre10.g422500 2.0kb downstream 2.0kb downstream 7772 true chromosome_10: 706652-714423 Chlamydomonas reinhardtii
Cre10.g422500 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 712424-714423 Chlamydomonas reinhardtii
Cre10.g422500 5.0kb upstream 5.0kb upstream 10772 true chromosome_10: 701652-712423 Chlamydomonas reinhardtii
Cre10.g422500 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 701652-706651 Chlamydomonas reinhardtii
Cre10.g422500 5.0kb downstream 5.0kb downstream 10772 true chromosome_10: 706652-717423 Chlamydomonas reinhardtii
Cre10.g422500 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 712424-717423 Chlamydomonas reinhardtii
Cre10.g422500 10.0kb upstream 10.0kb upstream 15772 true chromosome_10: 696652-712423 Chlamydomonas reinhardtii
Cre10.g422500 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 696652-706651 Chlamydomonas reinhardtii
Cre10.g422500 10.0kb downstream 10.0kb downstream 15772 true chromosome_10: 706652-722423 Chlamydomonas reinhardtii
Cre10.g422500 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 712424-722423 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124084981 5260 Chlorophyte View MSA
123402487 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.051     Low Low
cufflinks 1.248        
cufflinks 1.38        
cufflinks 1.059        
cufflinks 1.083        
cufflinks 0.938        
cufflinks 2.451       High
cufflinks 1.573        
cufflinks 0.065     Low Low
cufflinks 0.491        
cufflinks 1.156        
cufflinks 1.042        
cufflinks 0.85        
cufflinks 0.984        
cufflinks 0.717        
cufflinks 0.051     Low Low
cufflinks 0.081     Low Low
cufflinks 1.066        
cufflinks 0.39        
cufflinks 1.731        
cufflinks 0.867        
cufflinks 0.051     Low Low
cufflinks 0.496        
cufflinks 1.243        
cufflinks 0.132       Low
cufflinks 0.13127 0.0 0.300607 Low Low
cufflinks 1.54703 0.0 3.10928    
cufflinks 2.18886 0.0 4.77691    
cufflinks 1.9786 0.241818 3.71539   High
cufflinks 3.48935 0.603941 6.37475    

0 Strain