Gene : CLPD1 C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g465550 Defline:  (1 of 1) K03696 - ATP-dependent Clp protease ATP-binding subunit ClpC (clpC)
Genomic Order:  1041 Name:  ? Cre10.g465550
Secondary Identifier:  ? PAC:30790230
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g465550 0.5kb upstream 0.5kb upstream 10878 true chromosome_10: 6355995-6366872 Chlamydomonas reinhardtii
Cre10.g465550 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 6366373-6366872 Chlamydomonas reinhardtii
Cre10.g465550 0.5kb downstream 0.5kb downstream 10878 true chromosome_10: 6355495-6366372 Chlamydomonas reinhardtii
Cre10.g465550 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 6355495-6355994 Chlamydomonas reinhardtii
Cre10.g465550 1.0kb upstream 1.0kb upstream 11378 true chromosome_10: 6355995-6367372 Chlamydomonas reinhardtii
Cre10.g465550 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 6366373-6367372 Chlamydomonas reinhardtii
Cre10.g465550 1.0kb downstream 1.0kb downstream 11378 true chromosome_10: 6354995-6366372 Chlamydomonas reinhardtii
Cre10.g465550 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 6354995-6355994 Chlamydomonas reinhardtii
Cre10.g465550 2.0kb upstream 2.0kb upstream 12378 true chromosome_10: 6355995-6368372 Chlamydomonas reinhardtii
Cre10.g465550 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 6366373-6368372 Chlamydomonas reinhardtii
Cre10.g465550 2.0kb downstream 2.0kb downstream 12378 true chromosome_10: 6353995-6366372 Chlamydomonas reinhardtii
Cre10.g465550 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 6353995-6355994 Chlamydomonas reinhardtii
Cre10.g465550 5.0kb upstream 5.0kb upstream 15378 true chromosome_10: 6355995-6371372 Chlamydomonas reinhardtii
Cre10.g465550 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 6366373-6371372 Chlamydomonas reinhardtii
Cre10.g465550 5.0kb downstream 5.0kb downstream 15378 true chromosome_10: 6350995-6366372 Chlamydomonas reinhardtii
Cre10.g465550 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 6350995-6355994 Chlamydomonas reinhardtii
Cre10.g465550 10.0kb upstream 10.0kb upstream 20378 true chromosome_10: 6355995-6376372 Chlamydomonas reinhardtii
Cre10.g465550 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 6366373-6376372 Chlamydomonas reinhardtii
Cre10.g465550 10.0kb downstream 10.0kb downstream 20378 true chromosome_10: 6345995-6366372 Chlamydomonas reinhardtii
Cre10.g465550 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 6345995-6355994 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111379 5260 Chlorophyte View MSA
123426532 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.533       Low
cufflinks 10.511        
cufflinks 60.672     High High
cufflinks 64.235     High High
cufflinks 7.083        
cufflinks 7.998        
cufflinks 26.356     High  
cufflinks 30.794     High  
cufflinks 0.436       Low
cufflinks 1.842       Low
cufflinks 98.644     High High
cufflinks 21.728     High  
cufflinks 5.279        
cufflinks 8.018        
cufflinks 29.744     High  
cufflinks 0.526       Low
cufflinks 2.593        
cufflinks 30.036     High  
cufflinks 6.668     High  
cufflinks 23.82     High  
cufflinks 29.466     High  
cufflinks 1.48       Low
cufflinks 11.661        
cufflinks 39.707     High  
cufflinks 1.016       Low
cufflinks 0.618011 0.0282816 1.20774 High High
cufflinks 12.5511 3.15123 21.951   Low
cufflinks 15.9096 0.0 32.5595    
cufflinks 24.8631 0.0 50.6127 High High
cufflinks 21.2817 1.96584 40.5976    

0 Strain