Gene : SSA20 C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g464400 Defline:  (1 of 1) 3.4.21.109 - Matriptase / Tumor-associated differentially-expressed gene 15 protein
Genomic Order:  1014 Name:  ? Cre10.g464400
Secondary Identifier:  ? PAC:30790433
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g464400 0.5kb upstream 0.5kb upstream 3876 true chromosome_10: 6210375-6214250 Chlamydomonas reinhardtii
Cre10.g464400 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 6213751-6214250 Chlamydomonas reinhardtii
Cre10.g464400 0.5kb downstream 0.5kb downstream 3876 true chromosome_10: 6209875-6213750 Chlamydomonas reinhardtii
Cre10.g464400 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 6209875-6210374 Chlamydomonas reinhardtii
Cre10.g464400 1.0kb upstream 1.0kb upstream 4376 true chromosome_10: 6210375-6214750 Chlamydomonas reinhardtii
Cre10.g464400 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 6213751-6214750 Chlamydomonas reinhardtii
Cre10.g464400 1.0kb downstream 1.0kb downstream 4376 true chromosome_10: 6209375-6213750 Chlamydomonas reinhardtii
Cre10.g464400 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 6209375-6210374 Chlamydomonas reinhardtii
Cre10.g464400 2.0kb upstream 2.0kb upstream 5376 true chromosome_10: 6210375-6215750 Chlamydomonas reinhardtii
Cre10.g464400 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 6213751-6215750 Chlamydomonas reinhardtii
Cre10.g464400 2.0kb downstream 2.0kb downstream 5376 true chromosome_10: 6208375-6213750 Chlamydomonas reinhardtii
Cre10.g464400 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 6208375-6210374 Chlamydomonas reinhardtii
Cre10.g464400 5.0kb upstream 5.0kb upstream 8376 true chromosome_10: 6210375-6218750 Chlamydomonas reinhardtii
Cre10.g464400 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 6213751-6218750 Chlamydomonas reinhardtii
Cre10.g464400 5.0kb downstream 5.0kb downstream 8376 true chromosome_10: 6205375-6213750 Chlamydomonas reinhardtii
Cre10.g464400 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 6205375-6210374 Chlamydomonas reinhardtii
Cre10.g464400 10.0kb upstream 10.0kb upstream 13376 true chromosome_10: 6210375-6223750 Chlamydomonas reinhardtii
Cre10.g464400 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 6213751-6223750 Chlamydomonas reinhardtii
Cre10.g464400 10.0kb downstream 10.0kb downstream 13376 true chromosome_10: 6200375-6213750 Chlamydomonas reinhardtii
Cre10.g464400 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 6200375-6210374 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094600 5260 Chlorophyte View MSA
123411398 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.017     Low High
cufflinks 0.015     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.009     Low  
cufflinks 0.009     Low  
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low High
cufflinks 0.005     Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0421473 0.0 0.130691 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain