Gene : DAP2 C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g467050 Defline:  (1 of 3) PF08190 - pre-RNA processing PIH1/Nop17 (PIH1)
Genomic Order:  1078 Name:  ? Cre10.g467050
Secondary Identifier:  ? PAC:30790213
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g467050 0.5kb upstream 0.5kb upstream 2902 true chromosome_10: 6540463-6543364 Chlamydomonas reinhardtii
Cre10.g467050 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 6540463-6540962 Chlamydomonas reinhardtii
Cre10.g467050 0.5kb downstream 0.5kb downstream 2902 true chromosome_10: 6540963-6543864 Chlamydomonas reinhardtii
Cre10.g467050 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 6543365-6543864 Chlamydomonas reinhardtii
Cre10.g467050 1.0kb upstream 1.0kb upstream 3402 true chromosome_10: 6539963-6543364 Chlamydomonas reinhardtii
Cre10.g467050 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 6539963-6540962 Chlamydomonas reinhardtii
Cre10.g467050 1.0kb downstream 1.0kb downstream 3402 true chromosome_10: 6540963-6544364 Chlamydomonas reinhardtii
Cre10.g467050 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 6543365-6544364 Chlamydomonas reinhardtii
Cre10.g467050 2.0kb upstream 2.0kb upstream 4402 true chromosome_10: 6538963-6543364 Chlamydomonas reinhardtii
Cre10.g467050 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 6538963-6540962 Chlamydomonas reinhardtii
Cre10.g467050 2.0kb downstream 2.0kb downstream 4402 true chromosome_10: 6540963-6545364 Chlamydomonas reinhardtii
Cre10.g467050 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 6543365-6545364 Chlamydomonas reinhardtii
Cre10.g467050 5.0kb upstream 5.0kb upstream 7402 true chromosome_10: 6535963-6543364 Chlamydomonas reinhardtii
Cre10.g467050 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 6535963-6540962 Chlamydomonas reinhardtii
Cre10.g467050 5.0kb downstream 5.0kb downstream 7402 true chromosome_10: 6540963-6548364 Chlamydomonas reinhardtii
Cre10.g467050 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 6543365-6548364 Chlamydomonas reinhardtii
Cre10.g467050 10.0kb upstream 10.0kb upstream 12402 true chromosome_10: 6530963-6543364 Chlamydomonas reinhardtii
Cre10.g467050 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 6530963-6540962 Chlamydomonas reinhardtii
Cre10.g467050 10.0kb downstream 10.0kb downstream 12402 true chromosome_10: 6540963-6553364 Chlamydomonas reinhardtii
Cre10.g467050 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 6543365-6553364 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111265 5260 Chlorophyte View MSA
123427362 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.036       Low
cufflinks 5.195        
cufflinks 6.756       High
cufflinks 6.567       High
cufflinks 4.541        
cufflinks 4.873        
cufflinks 5.109        
cufflinks 6.088       High
cufflinks 2.222       Low
cufflinks 1.897       Low
cufflinks 5.463        
cufflinks 4.531        
cufflinks 4.061        
cufflinks 4.559        
cufflinks 4.369        
cufflinks 3.354        
cufflinks 3.629        
cufflinks 4.835        
cufflinks 1.541       Low
cufflinks 5.441        
cufflinks 4.699        
cufflinks 3.077        
cufflinks 4.045        
cufflinks 5.898        
cufflinks 2.829        
cufflinks 3.96317 0.516174 7.41017   Low
cufflinks 5.90711 0.849814 10.9644    
cufflinks 10.2077 0.0 20.7205    
cufflinks 5.14124 0.802268 9.48022    
cufflinks 5.12287 0.702704 9.54303    

0 Strain