Gene : PRP20 C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g466250 Defline:  (1 of 1) K14554 - U3 small nucleolar RNA-associated protein 21 (UTP21, WDR36)
Genomic Order:  1061 Name:  ? Cre10.g466250
Secondary Identifier:  ? PAC:30790775
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g466250 0.5kb upstream 0.5kb upstream 8966 true chromosome_10: 6463037-6472002 Chlamydomonas reinhardtii
Cre10.g466250 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 6471503-6472002 Chlamydomonas reinhardtii
Cre10.g466250 0.5kb downstream 0.5kb downstream 8966 true chromosome_10: 6462537-6471502 Chlamydomonas reinhardtii
Cre10.g466250 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 6462537-6463036 Chlamydomonas reinhardtii
Cre10.g466250 1.0kb upstream 1.0kb upstream 9466 true chromosome_10: 6463037-6472502 Chlamydomonas reinhardtii
Cre10.g466250 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 6471503-6472502 Chlamydomonas reinhardtii
Cre10.g466250 1.0kb downstream 1.0kb downstream 9466 true chromosome_10: 6462037-6471502 Chlamydomonas reinhardtii
Cre10.g466250 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 6462037-6463036 Chlamydomonas reinhardtii
Cre10.g466250 2.0kb upstream 2.0kb upstream 10466 true chromosome_10: 6463037-6473502 Chlamydomonas reinhardtii
Cre10.g466250 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 6471503-6473502 Chlamydomonas reinhardtii
Cre10.g466250 2.0kb downstream 2.0kb downstream 10466 true chromosome_10: 6461037-6471502 Chlamydomonas reinhardtii
Cre10.g466250 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 6461037-6463036 Chlamydomonas reinhardtii
Cre10.g466250 5.0kb upstream 5.0kb upstream 13466 true chromosome_10: 6463037-6476502 Chlamydomonas reinhardtii
Cre10.g466250 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 6471503-6476502 Chlamydomonas reinhardtii
Cre10.g466250 5.0kb downstream 5.0kb downstream 13466 true chromosome_10: 6458037-6471502 Chlamydomonas reinhardtii
Cre10.g466250 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 6458037-6463036 Chlamydomonas reinhardtii
Cre10.g466250 10.0kb upstream 10.0kb upstream 18466 true chromosome_10: 6463037-6481502 Chlamydomonas reinhardtii
Cre10.g466250 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 6471503-6481502 Chlamydomonas reinhardtii
Cre10.g466250 10.0kb downstream 10.0kb downstream 18466 true chromosome_10: 6453037-6471502 Chlamydomonas reinhardtii
Cre10.g466250 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 6453037-6463036 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110398 5260 Chlorophyte View MSA
123424252 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.694        
cufflinks 1.383       High
cufflinks 0.669        
cufflinks 0.882        
cufflinks 1.033        
cufflinks 0.96        
cufflinks 1.356        
cufflinks 1.16        
cufflinks 0.796        
cufflinks 0.25       Low
cufflinks 1.057        
cufflinks 1.093        
cufflinks 0.362       Low
cufflinks 1.064        
cufflinks 0.815        
cufflinks 1.21        
cufflinks 0.183       Low
cufflinks 0.769        
cufflinks 0.344       Low
cufflinks 1.222        
cufflinks 1.052        
cufflinks 0.385       Low
cufflinks 1.298        
cufflinks 1.176        
cufflinks 0.214       Low
cufflinks 16.5158 0.897604 32.134   High
cufflinks 22.452 5.80768 39.0964   High
cufflinks 1.07025 0.0 2.58183    
cufflinks 5.54235 0.881213 10.2035   Low
cufflinks 11.2116 2.10767 20.3155   High

0 Strain