Gene : Cre10.g443801 C. reinhardtii v5.6
Defline:  (1 of 3) PF13401 - AAA domain (AAA_22) Genomic Order:  561
Name:  ? Cre10.g443801 Secondary Identifier:  ? PAC:30790576
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g443801 0.5kb upstream 0.5kb upstream 5156 true chromosome_10: 3338703-3343858 Chlamydomonas reinhardtii
Cre10.g443801 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 3343359-3343858 Chlamydomonas reinhardtii
Cre10.g443801 0.5kb downstream 0.5kb downstream 5156 true chromosome_10: 3338203-3343358 Chlamydomonas reinhardtii
Cre10.g443801 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 3338203-3338702 Chlamydomonas reinhardtii
Cre10.g443801 1.0kb upstream 1.0kb upstream 5656 true chromosome_10: 3338703-3344358 Chlamydomonas reinhardtii
Cre10.g443801 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 3343359-3344358 Chlamydomonas reinhardtii
Cre10.g443801 1.0kb downstream 1.0kb downstream 5656 true chromosome_10: 3337703-3343358 Chlamydomonas reinhardtii
Cre10.g443801 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 3337703-3338702 Chlamydomonas reinhardtii
Cre10.g443801 2.0kb upstream 2.0kb upstream 6656 true chromosome_10: 3338703-3345358 Chlamydomonas reinhardtii
Cre10.g443801 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 3343359-3345358 Chlamydomonas reinhardtii
Cre10.g443801 2.0kb downstream 2.0kb downstream 6656 true chromosome_10: 3336703-3343358 Chlamydomonas reinhardtii
Cre10.g443801 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 3336703-3338702 Chlamydomonas reinhardtii
Cre10.g443801 5.0kb upstream 5.0kb upstream 9656 true chromosome_10: 3338703-3348358 Chlamydomonas reinhardtii
Cre10.g443801 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 3343359-3348358 Chlamydomonas reinhardtii
Cre10.g443801 5.0kb downstream 5.0kb downstream 9656 true chromosome_10: 3333703-3343358 Chlamydomonas reinhardtii
Cre10.g443801 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 3333703-3338702 Chlamydomonas reinhardtii
Cre10.g443801 10.0kb upstream 10.0kb upstream 14656 true chromosome_10: 3338703-3353358 Chlamydomonas reinhardtii
Cre10.g443801 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 3343359-3353358 Chlamydomonas reinhardtii
Cre10.g443801 10.0kb downstream 10.0kb downstream 14656 true chromosome_10: 3328703-3343358 Chlamydomonas reinhardtii
Cre10.g443801 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 3328703-3338702 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111333 5260 Chlorophyte View MSA
123423260 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.012     Low Low
cufflinks 0.881        
cufflinks 0.825        
cufflinks 0.799        
cufflinks 0.496        
cufflinks 0.654        
cufflinks 1.615       High
cufflinks 1.359        
cufflinks 0.016     Low Low
cufflinks 0.159        
cufflinks 0.475        
cufflinks 0.94        
cufflinks 0.421        
cufflinks 0.56        
cufflinks 0.571        
cufflinks 0.041     Low Low
cufflinks 0.224        
cufflinks 0.557        
cufflinks 0.381        
cufflinks 1.274        
cufflinks 0.522        
cufflinks 0.185        
cufflinks 1.423       High
cufflinks 0.918        
cufflinks 0.234        
cufflinks 0.193445 0.0 0.449966 Low Low
cufflinks 0.973384 0.0 2.20583    
cufflinks 1.49221 0.0 3.58065    
cufflinks 1.31385 0.0 2.62792    
cufflinks 1.4391 0.0 2.93564    

0 Strain