Gene : Cre10.g450879 C. reinhardtii v5.6

Defline:  (1 of 1) K14859 - ribosome biogenesis protein SSF1/2 (SSF1_2) Genomic Order:  721
Name:  ? Cre10.g450879 Secondary Identifier:  ? PAC:30790091

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g450879 0.5kb upstream 0.5kb upstream 6905 true chromosome_10: 4307585-4314489 Chlamydomonas reinhardtii
Cre10.g450879 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 4313990-4314489 Chlamydomonas reinhardtii
Cre10.g450879 0.5kb downstream 0.5kb downstream 6905 true chromosome_10: 4307085-4313989 Chlamydomonas reinhardtii
Cre10.g450879 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 4307085-4307584 Chlamydomonas reinhardtii
Cre10.g450879 1.0kb upstream 1.0kb upstream 7405 true chromosome_10: 4307585-4314989 Chlamydomonas reinhardtii
Cre10.g450879 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 4313990-4314989 Chlamydomonas reinhardtii
Cre10.g450879 1.0kb downstream 1.0kb downstream 7405 true chromosome_10: 4306585-4313989 Chlamydomonas reinhardtii
Cre10.g450879 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 4306585-4307584 Chlamydomonas reinhardtii
Cre10.g450879 2.0kb upstream 2.0kb upstream 8405 true chromosome_10: 4307585-4315989 Chlamydomonas reinhardtii
Cre10.g450879 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 4313990-4315989 Chlamydomonas reinhardtii
Cre10.g450879 2.0kb downstream 2.0kb downstream 8405 true chromosome_10: 4305585-4313989 Chlamydomonas reinhardtii
Cre10.g450879 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 4305585-4307584 Chlamydomonas reinhardtii
Cre10.g450879 5.0kb upstream 5.0kb upstream 11405 true chromosome_10: 4307585-4318989 Chlamydomonas reinhardtii
Cre10.g450879 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 4313990-4318989 Chlamydomonas reinhardtii
Cre10.g450879 5.0kb downstream 5.0kb downstream 11405 true chromosome_10: 4302585-4313989 Chlamydomonas reinhardtii
Cre10.g450879 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 4302585-4307584 Chlamydomonas reinhardtii
Cre10.g450879 10.0kb upstream 10.0kb upstream 16405 true chromosome_10: 4307585-4323989 Chlamydomonas reinhardtii
Cre10.g450879 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 4313990-4323989 Chlamydomonas reinhardtii
Cre10.g450879 10.0kb downstream 10.0kb downstream 16405 true chromosome_10: 4297585-4313989 Chlamydomonas reinhardtii
Cre10.g450879 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 4297585-4307584 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111039 5260 Chlorophyte View MSA
123424423 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.862        
cufflinks 2.636        
cufflinks 1.27        
cufflinks 2.055        
cufflinks 2.34        
cufflinks 1.592        
cufflinks 2.221        
cufflinks 1.806        
cufflinks 0.917        
cufflinks 0.312       Low
cufflinks 2.438        
cufflinks 1.912        
cufflinks 0.27       Low
cufflinks 2.001        
cufflinks 1.397        
cufflinks 1.652        
cufflinks 0.102     Low Low
cufflinks 1.479        
cufflinks 0.438        
cufflinks 2.307        
cufflinks 1.905        
cufflinks 0.216       Low
cufflinks 2.006        
cufflinks 1.598        
cufflinks 0.134       Low
cufflinks 19.9554 1.35834 38.5525   High
cufflinks 22.7163 5.96586 39.4668   High
cufflinks 0.885773 0.0 2.29131    
cufflinks 10.4821 1.37658 19.5876   Low
cufflinks 24.8572 3.88929 45.8251   High

0 Strain