Gene : Cre11.g474700 C. reinhardtii v5.6
Defline:  (1 of 10) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin) Genomic Order:  335
Name:  ? Cre11.g474700 Secondary Identifier:  ? PAC:30775620
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre11.g474700 0.5kb upstream 0.5kb upstream 5452 true chromosome_11: 2380863-2386314 Chlamydomonas reinhardtii
Cre11.g474700 0.5kb upstream 0.5kb upstream 500 false chromosome_11: 2380863-2381362 Chlamydomonas reinhardtii
Cre11.g474700 0.5kb downstream 0.5kb downstream 5452 true chromosome_11: 2381363-2386814 Chlamydomonas reinhardtii
Cre11.g474700 0.5kb downstream 0.5kb downstream 500 false chromosome_11: 2386315-2386814 Chlamydomonas reinhardtii
Cre11.g474700 1.0kb upstream 1.0kb upstream 5952 true chromosome_11: 2380363-2386314 Chlamydomonas reinhardtii
Cre11.g474700 1.0kb upstream 1.0kb upstream 1000 false chromosome_11: 2380363-2381362 Chlamydomonas reinhardtii
Cre11.g474700 1.0kb downstream 1.0kb downstream 5952 true chromosome_11: 2381363-2387314 Chlamydomonas reinhardtii
Cre11.g474700 1.0kb downstream 1.0kb downstream 1000 false chromosome_11: 2386315-2387314 Chlamydomonas reinhardtii
Cre11.g474700 2.0kb upstream 2.0kb upstream 6952 true chromosome_11: 2379363-2386314 Chlamydomonas reinhardtii
Cre11.g474700 2.0kb upstream 2.0kb upstream 2000 false chromosome_11: 2379363-2381362 Chlamydomonas reinhardtii
Cre11.g474700 2.0kb downstream 2.0kb downstream 6952 true chromosome_11: 2381363-2388314 Chlamydomonas reinhardtii
Cre11.g474700 2.0kb downstream 2.0kb downstream 2000 false chromosome_11: 2386315-2388314 Chlamydomonas reinhardtii
Cre11.g474700 5.0kb upstream 5.0kb upstream 9952 true chromosome_11: 2376363-2386314 Chlamydomonas reinhardtii
Cre11.g474700 5.0kb upstream 5.0kb upstream 5000 false chromosome_11: 2376363-2381362 Chlamydomonas reinhardtii
Cre11.g474700 5.0kb downstream 5.0kb downstream 9952 true chromosome_11: 2381363-2391314 Chlamydomonas reinhardtii
Cre11.g474700 5.0kb downstream 5.0kb downstream 5000 false chromosome_11: 2386315-2391314 Chlamydomonas reinhardtii
Cre11.g474700 10.0kb upstream 10.0kb upstream 14952 true chromosome_11: 2371363-2386314 Chlamydomonas reinhardtii
Cre11.g474700 10.0kb upstream 10.0kb upstream 10000 false chromosome_11: 2371363-2381362 Chlamydomonas reinhardtii
Cre11.g474700 10.0kb downstream 10.0kb downstream 14952 true chromosome_11: 2381363-2396314 Chlamydomonas reinhardtii
Cre11.g474700 10.0kb downstream 10.0kb downstream 10000 false chromosome_11: 2386315-2396314 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113433 5260 Chlorophyte View MSA
123427884 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.011       Low
cufflinks 3.866        
cufflinks 5.703        
cufflinks 5.381        
cufflinks 3.344        
cufflinks 3.922        
cufflinks 4.415        
cufflinks 5.772        
cufflinks 2.841        
cufflinks 1.623       Low
cufflinks 4.606        
cufflinks 5.433        
cufflinks 3.371        
cufflinks 3.621        
cufflinks 4.622        
cufflinks 2.878        
cufflinks 3.711        
cufflinks 4.194        
cufflinks 1.06       Low
cufflinks 4.853        
cufflinks 4.411        
cufflinks 4.237        
cufflinks 5.135        
cufflinks 5.533        
cufflinks 5.516        
cufflinks 3.56644 0.550639 6.58225    
cufflinks 3.26921 0.509439 6.02899    
cufflinks 7.9915 0.0 16.0972    
cufflinks 3.80742 0.618258 6.99659    
cufflinks 6.70442 1.30712 12.1017   High

0 Strain