Gene : Cre11.g476450 C. reinhardtii v5.6
Defline:  (1 of 2) PTHR22807//PTHR22807:SF34 - NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING // METHYLTRANSFERASE NSUN6-RELATED Genomic Order:  375
Name:  ? Cre11.g476450 Secondary Identifier:  ? PAC:30775921
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre11.g476450 0.5kb upstream 0.5kb upstream 6672 true chromosome_11: 2630955-2637626 Chlamydomonas reinhardtii
Cre11.g476450 0.5kb upstream 0.5kb upstream 500 false chromosome_11: 2630955-2631454 Chlamydomonas reinhardtii
Cre11.g476450 0.5kb downstream 0.5kb downstream 6672 true chromosome_11: 2631455-2638126 Chlamydomonas reinhardtii
Cre11.g476450 0.5kb downstream 0.5kb downstream 500 false chromosome_11: 2637627-2638126 Chlamydomonas reinhardtii
Cre11.g476450 1.0kb upstream 1.0kb upstream 7172 true chromosome_11: 2630455-2637626 Chlamydomonas reinhardtii
Cre11.g476450 1.0kb upstream 1.0kb upstream 1000 false chromosome_11: 2630455-2631454 Chlamydomonas reinhardtii
Cre11.g476450 1.0kb downstream 1.0kb downstream 7172 true chromosome_11: 2631455-2638626 Chlamydomonas reinhardtii
Cre11.g476450 1.0kb downstream 1.0kb downstream 1000 false chromosome_11: 2637627-2638626 Chlamydomonas reinhardtii
Cre11.g476450 2.0kb upstream 2.0kb upstream 8172 true chromosome_11: 2629455-2637626 Chlamydomonas reinhardtii
Cre11.g476450 2.0kb upstream 2.0kb upstream 2000 false chromosome_11: 2629455-2631454 Chlamydomonas reinhardtii
Cre11.g476450 2.0kb downstream 2.0kb downstream 8172 true chromosome_11: 2631455-2639626 Chlamydomonas reinhardtii
Cre11.g476450 2.0kb downstream 2.0kb downstream 2000 false chromosome_11: 2637627-2639626 Chlamydomonas reinhardtii
Cre11.g476450 5.0kb upstream 5.0kb upstream 11172 true chromosome_11: 2626455-2637626 Chlamydomonas reinhardtii
Cre11.g476450 5.0kb upstream 5.0kb upstream 5000 false chromosome_11: 2626455-2631454 Chlamydomonas reinhardtii
Cre11.g476450 5.0kb downstream 5.0kb downstream 11172 true chromosome_11: 2631455-2642626 Chlamydomonas reinhardtii
Cre11.g476450 5.0kb downstream 5.0kb downstream 5000 false chromosome_11: 2637627-2642626 Chlamydomonas reinhardtii
Cre11.g476450 10.0kb upstream 10.0kb upstream 16172 true chromosome_11: 2621455-2637626 Chlamydomonas reinhardtii
Cre11.g476450 10.0kb upstream 10.0kb upstream 10000 false chromosome_11: 2621455-2631454 Chlamydomonas reinhardtii
Cre11.g476450 10.0kb downstream 10.0kb downstream 16172 true chromosome_11: 2631455-2647626 Chlamydomonas reinhardtii
Cre11.g476450 10.0kb downstream 10.0kb downstream 10000 false chromosome_11: 2637627-2647626 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124086096 5260 Chlorophyte View MSA
123427467 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.543        
cufflinks 0.635        
cufflinks 0.279        
cufflinks 0.391        
cufflinks 0.497        
cufflinks 0.446        
cufflinks 0.334        
cufflinks 0.562        
cufflinks 0.602        
cufflinks 0.151       Low
cufflinks 0.353        
cufflinks 0.517        
cufflinks 0.255        
cufflinks 0.523        
cufflinks 0.42        
cufflinks 0.711       High
cufflinks 0.503        
cufflinks 0.363        
cufflinks 0.089       Low
cufflinks 0.288        
cufflinks 0.458        
cufflinks 0.871       High
cufflinks 0.265        
cufflinks 0.638        
cufflinks 0.593        
cufflinks 0.928045 0.00324229 1.85285   Low
cufflinks 2.72062 0.362411 5.07884    
cufflinks 0.124173 0.0 0.432152 Low Low
cufflinks 1.06749 0.0281587 2.10682   Low
cufflinks 1.25316 0.0361951 2.47012    

0 Strain