Gene : Cre11.g480950 C. reinhardtii v5.6
Defline:  (1 of 5) PTHR13711 - SWI/SNF-RELATED CHROMATIN BINDING PROTEIN Genomic Order:  476
Name:  ? Cre11.g480950 Secondary Identifier:  ? PAC:30775842
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre11.g480950 0.5kb upstream 0.5kb upstream 2309 true chromosome_11: 3432312-3434620 Chlamydomonas reinhardtii
Cre11.g480950 0.5kb upstream 0.5kb upstream 500 false chromosome_11: 3434121-3434620 Chlamydomonas reinhardtii
Cre11.g480950 0.5kb downstream 0.5kb downstream 2309 true chromosome_11: 3431812-3434120 Chlamydomonas reinhardtii
Cre11.g480950 0.5kb downstream 0.5kb downstream 500 false chromosome_11: 3431812-3432311 Chlamydomonas reinhardtii
Cre11.g480950 1.0kb upstream 1.0kb upstream 2809 true chromosome_11: 3432312-3435120 Chlamydomonas reinhardtii
Cre11.g480950 1.0kb upstream 1.0kb upstream 1000 false chromosome_11: 3434121-3435120 Chlamydomonas reinhardtii
Cre11.g480950 1.0kb downstream 1.0kb downstream 2809 true chromosome_11: 3431312-3434120 Chlamydomonas reinhardtii
Cre11.g480950 1.0kb downstream 1.0kb downstream 1000 false chromosome_11: 3431312-3432311 Chlamydomonas reinhardtii
Cre11.g480950 2.0kb upstream 2.0kb upstream 3809 true chromosome_11: 3432312-3436120 Chlamydomonas reinhardtii
Cre11.g480950 2.0kb upstream 2.0kb upstream 2000 false chromosome_11: 3434121-3436120 Chlamydomonas reinhardtii
Cre11.g480950 2.0kb downstream 2.0kb downstream 3809 true chromosome_11: 3430312-3434120 Chlamydomonas reinhardtii
Cre11.g480950 2.0kb downstream 2.0kb downstream 2000 false chromosome_11: 3430312-3432311 Chlamydomonas reinhardtii
Cre11.g480950 5.0kb upstream 5.0kb upstream 6809 true chromosome_11: 3432312-3439120 Chlamydomonas reinhardtii
Cre11.g480950 5.0kb upstream 5.0kb upstream 5000 false chromosome_11: 3434121-3439120 Chlamydomonas reinhardtii
Cre11.g480950 5.0kb downstream 5.0kb downstream 6809 true chromosome_11: 3427312-3434120 Chlamydomonas reinhardtii
Cre11.g480950 5.0kb downstream 5.0kb downstream 5000 false chromosome_11: 3427312-3432311 Chlamydomonas reinhardtii
Cre11.g480950 10.0kb upstream 10.0kb upstream 11809 true chromosome_11: 3432312-3444120 Chlamydomonas reinhardtii
Cre11.g480950 10.0kb upstream 10.0kb upstream 10000 false chromosome_11: 3434121-3444120 Chlamydomonas reinhardtii
Cre11.g480950 10.0kb downstream 10.0kb downstream 11809 true chromosome_11: 3422312-3434120 Chlamydomonas reinhardtii
Cre11.g480950 10.0kb downstream 10.0kb downstream 10000 false chromosome_11: 3422312-3432311 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112512 5260 Chlorophyte View MSA
123429029 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.197     High  
cufflinks 33.858     High  
cufflinks 73.158     High High
cufflinks 62.557     High  
cufflinks 18.522     High  
cufflinks 30.708     High  
cufflinks 44.823     High  
cufflinks 63.55     High  
cufflinks 13.134     High Low
cufflinks 10.358     High Low
cufflinks 53.124     High  
cufflinks 43.112     High  
cufflinks 55.624     High  
cufflinks 29.997     High  
cufflinks 48.627     High  
cufflinks 2.998       Low
cufflinks 21.489     High  
cufflinks 51.119     High  
cufflinks 74.28     High High
cufflinks 60.832     High  
cufflinks 26.394     High  
cufflinks 11.292     High Low
cufflinks 109.989     High High
cufflinks 48.809     High  
cufflinks 25.742     High  
cufflinks 10.1735 1.70125 18.6458   High
cufflinks 8.0408 1.4963 14.5853   Low
cufflinks 19.7129 0.0 39.6149    
cufflinks 9.05831 1.53587 16.5808    
cufflinks 21.0778 4.1776 37.9781    

0 Strain