Gene : CPLD64 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g485850 Defline:  (1 of 1) KOG4526 - Predicted membrane protein
Genomic Order:  276 Name:  ? Cre12.g485850
Secondary Identifier:  ? PAC:30792533
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g485850 0.5kb upstream 0.5kb upstream 2896 true chromosome_12: 1680460-1683355 Chlamydomonas reinhardtii
Cre12.g485850 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 1680460-1680959 Chlamydomonas reinhardtii
Cre12.g485850 0.5kb downstream 0.5kb downstream 2896 true chromosome_12: 1680960-1683855 Chlamydomonas reinhardtii
Cre12.g485850 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 1683356-1683855 Chlamydomonas reinhardtii
Cre12.g485850 1.0kb upstream 1.0kb upstream 3396 true chromosome_12: 1679960-1683355 Chlamydomonas reinhardtii
Cre12.g485850 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 1679960-1680959 Chlamydomonas reinhardtii
Cre12.g485850 1.0kb downstream 1.0kb downstream 3396 true chromosome_12: 1680960-1684355 Chlamydomonas reinhardtii
Cre12.g485850 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 1683356-1684355 Chlamydomonas reinhardtii
Cre12.g485850 2.0kb upstream 2.0kb upstream 4396 true chromosome_12: 1678960-1683355 Chlamydomonas reinhardtii
Cre12.g485850 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 1678960-1680959 Chlamydomonas reinhardtii
Cre12.g485850 2.0kb downstream 2.0kb downstream 4396 true chromosome_12: 1680960-1685355 Chlamydomonas reinhardtii
Cre12.g485850 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 1683356-1685355 Chlamydomonas reinhardtii
Cre12.g485850 5.0kb upstream 5.0kb upstream 7396 true chromosome_12: 1675960-1683355 Chlamydomonas reinhardtii
Cre12.g485850 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 1675960-1680959 Chlamydomonas reinhardtii
Cre12.g485850 5.0kb downstream 5.0kb downstream 7396 true chromosome_12: 1680960-1688355 Chlamydomonas reinhardtii
Cre12.g485850 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 1683356-1688355 Chlamydomonas reinhardtii
Cre12.g485850 10.0kb upstream 10.0kb upstream 12396 true chromosome_12: 1670960-1683355 Chlamydomonas reinhardtii
Cre12.g485850 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 1670960-1680959 Chlamydomonas reinhardtii
Cre12.g485850 10.0kb downstream 10.0kb downstream 12396 true chromosome_12: 1680960-1693355 Chlamydomonas reinhardtii
Cre12.g485850 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 1683356-1693355 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111372 5260 Chlorophyte View MSA
123424955 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.131     High High
cufflinks 18.751     High  
cufflinks 13.837       Low
cufflinks 18.833     High  
cufflinks 19.73     High  
cufflinks 20.521     High  
cufflinks 11.552       Low
cufflinks 22.429     High  
cufflinks 27.208     High  
cufflinks 13.764     High Low
cufflinks 15.648     High  
cufflinks 24.871     High  
cufflinks 26.427     High  
cufflinks 16.315     High  
cufflinks 23.36     High  
cufflinks 30.576     High  
cufflinks 38.44     High High
cufflinks 15.735     High  
cufflinks 12.962     High Low
cufflinks 32.646     High  
cufflinks 20.296     High  
cufflinks 46.183     High High
cufflinks 18.846     High  
cufflinks 31.39     High  
cufflinks 40.025     High High
cufflinks 54.8478 1.69859 107.997 High High
cufflinks 33.7954 9.21692 58.3738 High  
cufflinks 33.0244 0.0 66.5346 High  
cufflinks 18.0575 2.54399 33.571    
cufflinks 22.3711 4.49471 40.2475   Low

0 Strain