Gene : Cre11.g467663 C. reinhardtii v5.6
Defline:  (1 of 2) PF01833//PF10162 - IPT/TIG domain (TIG) // G8 domain (G8) Genomic Order:  138
Name:  ? Cre11.g467663 Secondary Identifier:  ? PAC:30775675
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre11.g467663 0.5kb upstream 0.5kb upstream 27322 true chromosome_11: 941754-969075 Chlamydomonas reinhardtii
Cre11.g467663 0.5kb upstream 0.5kb upstream 500 false chromosome_11: 941754-942253 Chlamydomonas reinhardtii
Cre11.g467663 0.5kb downstream 0.5kb downstream 27322 true chromosome_11: 942254-969575 Chlamydomonas reinhardtii
Cre11.g467663 0.5kb downstream 0.5kb downstream 500 false chromosome_11: 969076-969575 Chlamydomonas reinhardtii
Cre11.g467663 1.0kb upstream 1.0kb upstream 27822 true chromosome_11: 941254-969075 Chlamydomonas reinhardtii
Cre11.g467663 1.0kb upstream 1.0kb upstream 1000 false chromosome_11: 941254-942253 Chlamydomonas reinhardtii
Cre11.g467663 1.0kb downstream 1.0kb downstream 27822 true chromosome_11: 942254-970075 Chlamydomonas reinhardtii
Cre11.g467663 1.0kb downstream 1.0kb downstream 1000 false chromosome_11: 969076-970075 Chlamydomonas reinhardtii
Cre11.g467663 2.0kb upstream 2.0kb upstream 28822 true chromosome_11: 940254-969075 Chlamydomonas reinhardtii
Cre11.g467663 2.0kb upstream 2.0kb upstream 2000 false chromosome_11: 940254-942253 Chlamydomonas reinhardtii
Cre11.g467663 2.0kb downstream 2.0kb downstream 28822 true chromosome_11: 942254-971075 Chlamydomonas reinhardtii
Cre11.g467663 2.0kb downstream 2.0kb downstream 2000 false chromosome_11: 969076-971075 Chlamydomonas reinhardtii
Cre11.g467663 5.0kb upstream 5.0kb upstream 31822 true chromosome_11: 937254-969075 Chlamydomonas reinhardtii
Cre11.g467663 5.0kb upstream 5.0kb upstream 5000 false chromosome_11: 937254-942253 Chlamydomonas reinhardtii
Cre11.g467663 5.0kb downstream 5.0kb downstream 31822 true chromosome_11: 942254-974075 Chlamydomonas reinhardtii
Cre11.g467663 5.0kb downstream 5.0kb downstream 5000 false chromosome_11: 969076-974075 Chlamydomonas reinhardtii
Cre11.g467663 10.0kb upstream 10.0kb upstream 36822 true chromosome_11: 932254-969075 Chlamydomonas reinhardtii
Cre11.g467663 10.0kb upstream 10.0kb upstream 10000 false chromosome_11: 932254-942253 Chlamydomonas reinhardtii
Cre11.g467663 10.0kb downstream 10.0kb downstream 36822 true chromosome_11: 942254-979075 Chlamydomonas reinhardtii
Cre11.g467663 10.0kb downstream 10.0kb downstream 10000 false chromosome_11: 969076-979075 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094451 5260 Chlorophyte View MSA
123411287 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.56        
cufflinks 0.978        
cufflinks 0.444        
cufflinks 0.677        
cufflinks 0.698        
cufflinks 0.488        
cufflinks 1.136       High
cufflinks 0.787        
cufflinks 1.066       High
cufflinks 0.253       Low
cufflinks 0.567        
cufflinks 0.971        
cufflinks 0.193       Low
cufflinks 0.499        
cufflinks 0.913        
cufflinks 0.553        
cufflinks 0.782        
cufflinks 0.608        
cufflinks 0.174       Low
cufflinks 0.541        
cufflinks 0.818        
cufflinks 1.141       High
cufflinks 0.622        
cufflinks 0.622        
cufflinks 1.31       High
cufflinks 1.48107 0.193298 2.76883   High
cufflinks 2.19606 0.598334 3.79378    
cufflinks 0.798204 0.0 1.66297    
cufflinks 1.60694 0.197704 3.01618   High
cufflinks 1.66997 0.331143 3.00879   High

0 Strain