Gene : CPN23 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g505850 Defline:  (1 of 2) PTHR10772//PTHR10772:SF0 - 10 KDA HEAT SHOCK PROTEIN // 20 KDA CHAPERONIN, CHLOROPLASTIC
Genomic Order:  439 Name:  ? Cre12.g505850
Secondary Identifier:  ? PAC:30793371
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g505850 0.5kb upstream 0.5kb upstream 2546 true chromosome_12: 2533877-2536422 Chlamydomonas reinhardtii
Cre12.g505850 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 2535923-2536422 Chlamydomonas reinhardtii
Cre12.g505850 0.5kb downstream 0.5kb downstream 2546 true chromosome_12: 2533377-2535922 Chlamydomonas reinhardtii
Cre12.g505850 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 2533377-2533876 Chlamydomonas reinhardtii
Cre12.g505850 1.0kb upstream 1.0kb upstream 3046 true chromosome_12: 2533877-2536922 Chlamydomonas reinhardtii
Cre12.g505850 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 2535923-2536922 Chlamydomonas reinhardtii
Cre12.g505850 1.0kb downstream 1.0kb downstream 3046 true chromosome_12: 2532877-2535922 Chlamydomonas reinhardtii
Cre12.g505850 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 2532877-2533876 Chlamydomonas reinhardtii
Cre12.g505850 2.0kb upstream 2.0kb upstream 4046 true chromosome_12: 2533877-2537922 Chlamydomonas reinhardtii
Cre12.g505850 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 2535923-2537922 Chlamydomonas reinhardtii
Cre12.g505850 2.0kb downstream 2.0kb downstream 4046 true chromosome_12: 2531877-2535922 Chlamydomonas reinhardtii
Cre12.g505850 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 2531877-2533876 Chlamydomonas reinhardtii
Cre12.g505850 5.0kb upstream 5.0kb upstream 7046 true chromosome_12: 2533877-2540922 Chlamydomonas reinhardtii
Cre12.g505850 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 2535923-2540922 Chlamydomonas reinhardtii
Cre12.g505850 5.0kb downstream 5.0kb downstream 7046 true chromosome_12: 2528877-2535922 Chlamydomonas reinhardtii
Cre12.g505850 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 2528877-2533876 Chlamydomonas reinhardtii
Cre12.g505850 10.0kb upstream 10.0kb upstream 12046 true chromosome_12: 2533877-2545922 Chlamydomonas reinhardtii
Cre12.g505850 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 2535923-2545922 Chlamydomonas reinhardtii
Cre12.g505850 10.0kb downstream 10.0kb downstream 12046 true chromosome_12: 2523877-2535922 Chlamydomonas reinhardtii
Cre12.g505850 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 2523877-2533876 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113411 5260 Chlorophyte View MSA
123424643 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 150.633     High High
cufflinks 78.495     High  
cufflinks 50.724     High  
cufflinks 47.094     High  
cufflinks 85.366     High  
cufflinks 74.563     High  
cufflinks 20.568     High Low
cufflinks 43.587     High  
cufflinks 162.6     High High
cufflinks 112.885     High High
cufflinks 46.51     High  
cufflinks 48.799     High  
cufflinks 73.572     High  
cufflinks 82.356     High  
cufflinks 51.889     High  
cufflinks 152.79     High High
cufflinks 56.925     High  
cufflinks 63.521     High  
cufflinks 20.845     High Low
cufflinks 24.061     High Low
cufflinks 47.038     High  
cufflinks 64.749     High  
cufflinks 37.985     High  
cufflinks 60.451     High  
cufflinks 55.991     High  
cufflinks 81.336 0.0 164.806 High Low
cufflinks 80.0249 18.0768 141.973 High  
cufflinks 8.63115 0.0 17.6982   Low
cufflinks 45.8365 1.10773 90.5653 High Low
cufflinks 72.6557 7.30668 138.005 High  

0 Strain