Gene : Cre12.g517451 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR31773:SF9 - METACASPASE-1 Genomic Order:  744
Name:  ? Cre12.g517451 Secondary Identifier:  ? PAC:30792960
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g517451 0.5kb upstream 0.5kb upstream 4226 true chromosome_12: 4048370-4052595 Chlamydomonas reinhardtii
Cre12.g517451 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 4052096-4052595 Chlamydomonas reinhardtii
Cre12.g517451 0.5kb downstream 0.5kb downstream 4226 true chromosome_12: 4047870-4052095 Chlamydomonas reinhardtii
Cre12.g517451 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 4047870-4048369 Chlamydomonas reinhardtii
Cre12.g517451 1.0kb upstream 1.0kb upstream 4726 true chromosome_12: 4048370-4053095 Chlamydomonas reinhardtii
Cre12.g517451 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 4052096-4053095 Chlamydomonas reinhardtii
Cre12.g517451 1.0kb downstream 1.0kb downstream 4726 true chromosome_12: 4047370-4052095 Chlamydomonas reinhardtii
Cre12.g517451 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 4047370-4048369 Chlamydomonas reinhardtii
Cre12.g517451 2.0kb upstream 2.0kb upstream 5726 true chromosome_12: 4048370-4054095 Chlamydomonas reinhardtii
Cre12.g517451 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 4052096-4054095 Chlamydomonas reinhardtii
Cre12.g517451 2.0kb downstream 2.0kb downstream 5726 true chromosome_12: 4046370-4052095 Chlamydomonas reinhardtii
Cre12.g517451 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 4046370-4048369 Chlamydomonas reinhardtii
Cre12.g517451 5.0kb upstream 5.0kb upstream 8726 true chromosome_12: 4048370-4057095 Chlamydomonas reinhardtii
Cre12.g517451 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 4052096-4057095 Chlamydomonas reinhardtii
Cre12.g517451 5.0kb downstream 5.0kb downstream 8726 true chromosome_12: 4043370-4052095 Chlamydomonas reinhardtii
Cre12.g517451 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 4043370-4048369 Chlamydomonas reinhardtii
Cre12.g517451 10.0kb upstream 10.0kb upstream 13726 true chromosome_12: 4048370-4062095 Chlamydomonas reinhardtii
Cre12.g517451 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 4052096-4062095 Chlamydomonas reinhardtii
Cre12.g517451 10.0kb downstream 10.0kb downstream 13726 true chromosome_12: 4038370-4052095 Chlamydomonas reinhardtii
Cre12.g517451 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 4038370-4048369 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111035 5260 Chlorophyte View MSA
123428899 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.66       Low
cufflinks 1.447       Low
cufflinks 2.445        
cufflinks 4.386       High
cufflinks 2.935        
cufflinks 2.279        
cufflinks 2.664        
cufflinks 3.349        
cufflinks 3.121        
cufflinks 1.807        
cufflinks 4.205       High
cufflinks 3.106        
cufflinks 3.247        
cufflinks 2.856        
cufflinks 3.465        
cufflinks 2.107        
cufflinks 1.946        
cufflinks 2.042        
cufflinks 4.934       High
cufflinks 3.987        
cufflinks 2.051        
cufflinks 1.608       Low
cufflinks 4.214       High
cufflinks 3.065        
cufflinks 1.704        
cufflinks 15.3315 1.5074 29.1555   High
cufflinks 7.87015 1.87813 13.8622    
cufflinks 5.03443 0.0 10.476    
cufflinks 4.20019 0.663434 7.73695    
cufflinks 4.82126 0.772939 8.86958   Low

0 Strain