Gene : Cre12.g491952 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR19297//PTHR24269//PTHR24269:SF16 - GLYCOSYLTRANSFERASE 14 FAMILY MEMBER // FAMILY NOT NAMED // SUBFAMILY NOT NAMED Genomic Order:  150
Name:  ? Cre12.g491952 Secondary Identifier:  ? PAC:30792113
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g491952 0.5kb upstream 0.5kb upstream 21344 true chromosome_12: 975392-996735 Chlamydomonas reinhardtii
Cre12.g491952 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 996236-996735 Chlamydomonas reinhardtii
Cre12.g491952 0.5kb downstream 0.5kb downstream 21344 true chromosome_12: 974892-996235 Chlamydomonas reinhardtii
Cre12.g491952 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 974892-975391 Chlamydomonas reinhardtii
Cre12.g491952 1.0kb upstream 1.0kb upstream 21844 true chromosome_12: 975392-997235 Chlamydomonas reinhardtii
Cre12.g491952 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 996236-997235 Chlamydomonas reinhardtii
Cre12.g491952 1.0kb downstream 1.0kb downstream 21844 true chromosome_12: 974392-996235 Chlamydomonas reinhardtii
Cre12.g491952 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 974392-975391 Chlamydomonas reinhardtii
Cre12.g491952 2.0kb upstream 2.0kb upstream 22844 true chromosome_12: 975392-998235 Chlamydomonas reinhardtii
Cre12.g491952 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 996236-998235 Chlamydomonas reinhardtii
Cre12.g491952 2.0kb downstream 2.0kb downstream 22844 true chromosome_12: 973392-996235 Chlamydomonas reinhardtii
Cre12.g491952 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 973392-975391 Chlamydomonas reinhardtii
Cre12.g491952 5.0kb upstream 5.0kb upstream 25844 true chromosome_12: 975392-1001235 Chlamydomonas reinhardtii
Cre12.g491952 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 996236-1001235 Chlamydomonas reinhardtii
Cre12.g491952 5.0kb downstream 5.0kb downstream 25844 true chromosome_12: 970392-996235 Chlamydomonas reinhardtii
Cre12.g491952 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 970392-975391 Chlamydomonas reinhardtii
Cre12.g491952 10.0kb upstream 10.0kb upstream 30844 true chromosome_12: 975392-1006235 Chlamydomonas reinhardtii
Cre12.g491952 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 996236-1006235 Chlamydomonas reinhardtii
Cre12.g491952 10.0kb downstream 10.0kb downstream 30844 true chromosome_12: 965392-996235 Chlamydomonas reinhardtii
Cre12.g491952 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 965392-975391 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081051 5260 Chlorophyte Singleton cluster - no MSA
123398803 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.009     Low  
cufflinks 0.006     Low  
cufflinks 0.004     Low  
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.003     Low  
cufflinks 0.003     Low  
cufflinks 0.01     Low High
cufflinks 0.021     Low High
cufflinks 0.004     Low  
cufflinks 0.007     Low  
cufflinks 0.003     Low  
cufflinks 0.003     Low  
cufflinks 0.015     Low High
cufflinks 0.005     Low  
cufflinks 0.001     Low Low
cufflinks 0.005     Low  
cufflinks 0.003     Low  
cufflinks 0.002     Low Low
cufflinks 0.005     Low  
cufflinks 0.013     Low High
cufflinks 0.007     Low  
cufflinks 0.0223396 0.0 0.0614802 Low  
cufflinks 0.355249 0.0 0.916096 Low  
cufflinks 0.0637951 0.0 0.269194 Low  
cufflinks 0.0228489 0.0 0.0651384 Low  
cufflinks 0.125942 0.0 0.314241 Low  

0 Strain