Gene : Cre12.g533400 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR13527:SF0 - SAYSVFN DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  1102
Name:  ? Cre12.g533400 Secondary Identifier:  ? PAC:30792481
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g533400 0.5kb upstream 0.5kb upstream 3106 true chromosome_12: 5797119-5800224 Chlamydomonas reinhardtii
Cre12.g533400 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 5799725-5800224 Chlamydomonas reinhardtii
Cre12.g533400 0.5kb downstream 0.5kb downstream 3106 true chromosome_12: 5796619-5799724 Chlamydomonas reinhardtii
Cre12.g533400 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 5796619-5797118 Chlamydomonas reinhardtii
Cre12.g533400 1.0kb upstream 1.0kb upstream 3606 true chromosome_12: 5797119-5800724 Chlamydomonas reinhardtii
Cre12.g533400 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 5799725-5800724 Chlamydomonas reinhardtii
Cre12.g533400 1.0kb downstream 1.0kb downstream 3606 true chromosome_12: 5796119-5799724 Chlamydomonas reinhardtii
Cre12.g533400 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 5796119-5797118 Chlamydomonas reinhardtii
Cre12.g533400 2.0kb upstream 2.0kb upstream 4606 true chromosome_12: 5797119-5801724 Chlamydomonas reinhardtii
Cre12.g533400 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 5799725-5801724 Chlamydomonas reinhardtii
Cre12.g533400 2.0kb downstream 2.0kb downstream 4606 true chromosome_12: 5795119-5799724 Chlamydomonas reinhardtii
Cre12.g533400 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 5795119-5797118 Chlamydomonas reinhardtii
Cre12.g533400 5.0kb upstream 5.0kb upstream 7606 true chromosome_12: 5797119-5804724 Chlamydomonas reinhardtii
Cre12.g533400 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 5799725-5804724 Chlamydomonas reinhardtii
Cre12.g533400 5.0kb downstream 5.0kb downstream 7606 true chromosome_12: 5792119-5799724 Chlamydomonas reinhardtii
Cre12.g533400 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 5792119-5797118 Chlamydomonas reinhardtii
Cre12.g533400 10.0kb upstream 10.0kb upstream 12606 true chromosome_12: 5797119-5809724 Chlamydomonas reinhardtii
Cre12.g533400 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 5799725-5809724 Chlamydomonas reinhardtii
Cre12.g533400 10.0kb downstream 10.0kb downstream 12606 true chromosome_12: 5787119-5799724 Chlamydomonas reinhardtii
Cre12.g533400 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 5787119-5797118 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110681 5260 Chlorophyte View MSA
123428664 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.699        
cufflinks 0.995        
cufflinks 0.944        
cufflinks 0.839        
cufflinks 1.012        
cufflinks 1.224        
cufflinks 1.424        
cufflinks 1.303        
cufflinks 0.62       Low
cufflinks 0.353       Low
cufflinks 0.737        
cufflinks 1.655       High
cufflinks 0.85        
cufflinks 0.983        
cufflinks 0.786        
cufflinks 1.11        
cufflinks 1.751       High
cufflinks 1.104        
cufflinks 0.653       Low
cufflinks 2.544       High
cufflinks 0.995        
cufflinks 1.274        
cufflinks 1.399        
cufflinks 1.298        
cufflinks 1.858       High
cufflinks 0.998312 0.0 2.1348   Low
cufflinks 3.24669 0.0 6.70609    
cufflinks 0.206072 0.0 0.78157 Low Low
cufflinks 2.14605 0.0 4.34442    
cufflinks 1.43164 0.0 3.1144    

0 Strain