Gene : Cre12.g538050 C. reinhardtii v5.6
Defline:  (1 of 4) PTHR21580 - SHIPPO-1-RELATED Genomic Order:  1211
Name:  ? Cre12.g538050 Secondary Identifier:  ? PAC:30793284
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g538050 0.5kb upstream 0.5kb upstream 5960 true chromosome_12: 6446717-6452676 Chlamydomonas reinhardtii
Cre12.g538050 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 6452177-6452676 Chlamydomonas reinhardtii
Cre12.g538050 0.5kb downstream 0.5kb downstream 5960 true chromosome_12: 6446217-6452176 Chlamydomonas reinhardtii
Cre12.g538050 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 6446217-6446716 Chlamydomonas reinhardtii
Cre12.g538050 1.0kb upstream 1.0kb upstream 6460 true chromosome_12: 6446717-6453176 Chlamydomonas reinhardtii
Cre12.g538050 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 6452177-6453176 Chlamydomonas reinhardtii
Cre12.g538050 1.0kb downstream 1.0kb downstream 6460 true chromosome_12: 6445717-6452176 Chlamydomonas reinhardtii
Cre12.g538050 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 6445717-6446716 Chlamydomonas reinhardtii
Cre12.g538050 2.0kb upstream 2.0kb upstream 7460 true chromosome_12: 6446717-6454176 Chlamydomonas reinhardtii
Cre12.g538050 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 6452177-6454176 Chlamydomonas reinhardtii
Cre12.g538050 2.0kb downstream 2.0kb downstream 7460 true chromosome_12: 6444717-6452176 Chlamydomonas reinhardtii
Cre12.g538050 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 6444717-6446716 Chlamydomonas reinhardtii
Cre12.g538050 5.0kb upstream 5.0kb upstream 10460 true chromosome_12: 6446717-6457176 Chlamydomonas reinhardtii
Cre12.g538050 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 6452177-6457176 Chlamydomonas reinhardtii
Cre12.g538050 5.0kb downstream 5.0kb downstream 10460 true chromosome_12: 6441717-6452176 Chlamydomonas reinhardtii
Cre12.g538050 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 6441717-6446716 Chlamydomonas reinhardtii
Cre12.g538050 10.0kb upstream 10.0kb upstream 15460 true chromosome_12: 6446717-6462176 Chlamydomonas reinhardtii
Cre12.g538050 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 6452177-6462176 Chlamydomonas reinhardtii
Cre12.g538050 10.0kb downstream 10.0kb downstream 15460 true chromosome_12: 6436717-6452176 Chlamydomonas reinhardtii
Cre12.g538050 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 6436717-6446716 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124077268 5260 Chlorophyte View MSA
123395288 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.27       Low
cufflinks 3.649        
cufflinks 6.566       High
cufflinks 7.526       High
cufflinks 3.034        
cufflinks 3.299        
cufflinks 2.519        
cufflinks 4.092        
cufflinks 1.651        
cufflinks 1.725        
cufflinks 11.225       High
cufflinks 3.885        
cufflinks 2.026        
cufflinks 3.417        
cufflinks 5.402        
cufflinks 1.895        
cufflinks 1.772        
cufflinks 3.807        
cufflinks 0.809       Low
cufflinks 2.861        
cufflinks 5.413        
cufflinks 1.173       Low
cufflinks 2.741        
cufflinks 4.259        
cufflinks 1.707        
cufflinks 9.61396 1.14247 18.0855   High
cufflinks 8.11634 2.16171 14.071    
cufflinks 20.0389 0.0 40.5849   High
cufflinks 5.60038 0.912844 10.2879   Low
cufflinks 15.4359 2.63052 28.2414    

0 Strain