Gene : CCB2 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g537850 Defline:  (1 of 2) PF11152 - Protein of unknown function (DUF2930) (DUF2930)
Genomic Order:  1207 Name:  ? Cre12.g537850
Secondary Identifier:  ? PAC:30792401
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g537850 0.5kb upstream 0.5kb upstream 3872 true chromosome_12: 6430813-6434684 Chlamydomonas reinhardtii
Cre12.g537850 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 6434185-6434684 Chlamydomonas reinhardtii
Cre12.g537850 0.5kb downstream 0.5kb downstream 3872 true chromosome_12: 6430313-6434184 Chlamydomonas reinhardtii
Cre12.g537850 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 6430313-6430812 Chlamydomonas reinhardtii
Cre12.g537850 1.0kb upstream 1.0kb upstream 4372 true chromosome_12: 6430813-6435184 Chlamydomonas reinhardtii
Cre12.g537850 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 6434185-6435184 Chlamydomonas reinhardtii
Cre12.g537850 1.0kb downstream 1.0kb downstream 4372 true chromosome_12: 6429813-6434184 Chlamydomonas reinhardtii
Cre12.g537850 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 6429813-6430812 Chlamydomonas reinhardtii
Cre12.g537850 2.0kb upstream 2.0kb upstream 5372 true chromosome_12: 6430813-6436184 Chlamydomonas reinhardtii
Cre12.g537850 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 6434185-6436184 Chlamydomonas reinhardtii
Cre12.g537850 2.0kb downstream 2.0kb downstream 5372 true chromosome_12: 6428813-6434184 Chlamydomonas reinhardtii
Cre12.g537850 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 6428813-6430812 Chlamydomonas reinhardtii
Cre12.g537850 5.0kb upstream 5.0kb upstream 8372 true chromosome_12: 6430813-6439184 Chlamydomonas reinhardtii
Cre12.g537850 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 6434185-6439184 Chlamydomonas reinhardtii
Cre12.g537850 5.0kb downstream 5.0kb downstream 8372 true chromosome_12: 6425813-6434184 Chlamydomonas reinhardtii
Cre12.g537850 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 6425813-6430812 Chlamydomonas reinhardtii
Cre12.g537850 10.0kb upstream 10.0kb upstream 13372 true chromosome_12: 6430813-6444184 Chlamydomonas reinhardtii
Cre12.g537850 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 6434185-6444184 Chlamydomonas reinhardtii
Cre12.g537850 10.0kb downstream 10.0kb downstream 13372 true chromosome_12: 6420813-6434184 Chlamydomonas reinhardtii
Cre12.g537850 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 6420813-6430812 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109280 5260 Chlorophyte View MSA
123424310 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.33        
cufflinks 5.435        
cufflinks 4.284        
cufflinks 4.558        
cufflinks 5.393        
cufflinks 5.301        
cufflinks 2.275        
cufflinks 4.597        
cufflinks 6.156        
cufflinks 3.151        
cufflinks 3.896        
cufflinks 4.732        
cufflinks 6.367        
cufflinks 4.831        
cufflinks 3.729        
cufflinks 7.052       High
cufflinks 4.7        
cufflinks 4.217        
cufflinks 0.469       Low
cufflinks 1.382       Low
cufflinks 3.896        
cufflinks 4.905        
cufflinks 2.801        
cufflinks 4.749        
cufflinks 5.609        
cufflinks 22.1071 2.51449 41.6996    
cufflinks 18.3746 4.87928 31.8699    
cufflinks 13.0187 0.0 26.4972    
cufflinks 8.4333 1.40444 15.4622   Low
cufflinks 12.3136 2.24749 22.3796    

0 Strain