Gene : DXR1 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g546050 Defline:  (1 of 1) 1.1.1.267 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase / DXP-reductoisomerase
Genomic Order:  1594 Name:  ? Cre12.g546050
Secondary Identifier:  ? PAC:30793428
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-7560 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g546050 0.5kb upstream 0.5kb upstream 7214 true chromosome_12: 8710460-8717673 Chlamydomonas reinhardtii
Cre12.g546050 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 8717174-8717673 Chlamydomonas reinhardtii
Cre12.g546050 0.5kb downstream 0.5kb downstream 7214 true chromosome_12: 8709960-8717173 Chlamydomonas reinhardtii
Cre12.g546050 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 8709960-8710459 Chlamydomonas reinhardtii
Cre12.g546050 1.0kb upstream 1.0kb upstream 7714 true chromosome_12: 8710460-8718173 Chlamydomonas reinhardtii
Cre12.g546050 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 8717174-8718173 Chlamydomonas reinhardtii
Cre12.g546050 1.0kb downstream 1.0kb downstream 7714 true chromosome_12: 8709460-8717173 Chlamydomonas reinhardtii
Cre12.g546050 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 8709460-8710459 Chlamydomonas reinhardtii
Cre12.g546050 2.0kb upstream 2.0kb upstream 8714 true chromosome_12: 8710460-8719173 Chlamydomonas reinhardtii
Cre12.g546050 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 8717174-8719173 Chlamydomonas reinhardtii
Cre12.g546050 2.0kb downstream 2.0kb downstream 8714 true chromosome_12: 8708460-8717173 Chlamydomonas reinhardtii
Cre12.g546050 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 8708460-8710459 Chlamydomonas reinhardtii
Cre12.g546050 5.0kb upstream 5.0kb upstream 11714 true chromosome_12: 8710460-8722173 Chlamydomonas reinhardtii
Cre12.g546050 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 8717174-8722173 Chlamydomonas reinhardtii
Cre12.g546050 5.0kb downstream 5.0kb downstream 11714 true chromosome_12: 8705460-8717173 Chlamydomonas reinhardtii
Cre12.g546050 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 8705460-8710459 Chlamydomonas reinhardtii
Cre12.g546050 10.0kb upstream 10.0kb upstream 16714 true chromosome_12: 8710460-8727173 Chlamydomonas reinhardtii
Cre12.g546050 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 8717174-8727173 Chlamydomonas reinhardtii
Cre12.g546050 10.0kb downstream 10.0kb downstream 16714 true chromosome_12: 8700460-8717173 Chlamydomonas reinhardtii
Cre12.g546050 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 8700460-8710459 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109771 5260 Chlorophyte View MSA
123424385 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.878     High High
cufflinks 22.384     High  
cufflinks 9.203        
cufflinks 11.516        
cufflinks 22.262     High  
cufflinks 19.486     High  
cufflinks 4.995       Low
cufflinks 10.752        
cufflinks 36.675     High High
cufflinks 8.983     High  
cufflinks 8.069        
cufflinks 14.252     High  
cufflinks 7.69        
cufflinks 21.501     High  
cufflinks 13.052     High  
cufflinks 38.39     High High
cufflinks 30.839     High High
cufflinks 14.7     High  
cufflinks 1.0       Low
cufflinks 4.534       Low
cufflinks 12.932     High  
cufflinks 31.5     High High
cufflinks 6.923        
cufflinks 10.599        
cufflinks 31.782     High High
cufflinks 73.7553 0.0 150.849 High Low
cufflinks 95.2633 17.635 172.892 High  
cufflinks 34.9046 0.0 71.315 High  
cufflinks 40.0847 0.0 80.6036 High Low
cufflinks 64.0044 4.54904 123.46 High High

0 Strain