Gene : RFC1 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g521200 Defline:  (1 of 1) K10754 - replication factor C subunit 1 (RFC1)
Genomic Order:  823 Name:  ? Cre12.g521200
Secondary Identifier:  ? PAC:30793594
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g521200 0.5kb upstream 0.5kb upstream 9176 true chromosome_12: 4429992-4439167 Chlamydomonas reinhardtii
Cre12.g521200 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 4438668-4439167 Chlamydomonas reinhardtii
Cre12.g521200 0.5kb downstream 0.5kb downstream 9176 true chromosome_12: 4429492-4438667 Chlamydomonas reinhardtii
Cre12.g521200 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 4429492-4429991 Chlamydomonas reinhardtii
Cre12.g521200 1.0kb upstream 1.0kb upstream 9676 true chromosome_12: 4429992-4439667 Chlamydomonas reinhardtii
Cre12.g521200 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 4438668-4439667 Chlamydomonas reinhardtii
Cre12.g521200 1.0kb downstream 1.0kb downstream 9676 true chromosome_12: 4428992-4438667 Chlamydomonas reinhardtii
Cre12.g521200 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 4428992-4429991 Chlamydomonas reinhardtii
Cre12.g521200 2.0kb upstream 2.0kb upstream 10676 true chromosome_12: 4429992-4440667 Chlamydomonas reinhardtii
Cre12.g521200 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 4438668-4440667 Chlamydomonas reinhardtii
Cre12.g521200 2.0kb downstream 2.0kb downstream 10676 true chromosome_12: 4427992-4438667 Chlamydomonas reinhardtii
Cre12.g521200 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 4427992-4429991 Chlamydomonas reinhardtii
Cre12.g521200 5.0kb upstream 5.0kb upstream 13676 true chromosome_12: 4429992-4443667 Chlamydomonas reinhardtii
Cre12.g521200 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 4438668-4443667 Chlamydomonas reinhardtii
Cre12.g521200 5.0kb downstream 5.0kb downstream 13676 true chromosome_12: 4424992-4438667 Chlamydomonas reinhardtii
Cre12.g521200 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 4424992-4429991 Chlamydomonas reinhardtii
Cre12.g521200 10.0kb upstream 10.0kb upstream 18676 true chromosome_12: 4429992-4448667 Chlamydomonas reinhardtii
Cre12.g521200 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 4438668-4448667 Chlamydomonas reinhardtii
Cre12.g521200 10.0kb downstream 10.0kb downstream 18676 true chromosome_12: 4419992-4438667 Chlamydomonas reinhardtii
Cre12.g521200 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 4419992-4429991 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109647 5260 Chlorophyte View MSA
123425414 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.119       Low
cufflinks 1.321       High
cufflinks 1.13        
cufflinks 0.839        
cufflinks 0.658        
cufflinks 0.7        
cufflinks 1.56       High
cufflinks 1.347       High
cufflinks 0.219       Low
cufflinks 0.144       Low
cufflinks 0.807        
cufflinks 0.93        
cufflinks 0.391        
cufflinks 0.636        
cufflinks 0.608        
cufflinks 0.248       Low
cufflinks 0.362        
cufflinks 0.763        
cufflinks 0.121       Low
cufflinks 0.893        
cufflinks 0.448        
cufflinks 0.286        
cufflinks 1.303       High
cufflinks 0.923        
cufflinks 0.465        
cufflinks 0.494743 0.0 0.989566   Low
cufflinks 1.97287 0.263181 3.68255    
cufflinks 2.05863 0.0 4.31991    
cufflinks 1.78908 0.281346 3.29682    
cufflinks 3.56377 0.701609 6.42592   High

0 Strain