Gene : Cre12.g520150 C. reinhardtii v5.6
Defline:  (1 of 2) K12818 - ATP-dependent RNA helicase DHX8/PRP22 (DHX8, PRP22) Genomic Order:  801
Name:  ? Cre12.g520150 Secondary Identifier:  ? PAC:30792869
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g520150 0.5kb upstream 0.5kb upstream 8239 true chromosome_12: 4341259-4349497 Chlamydomonas reinhardtii
Cre12.g520150 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 4348998-4349497 Chlamydomonas reinhardtii
Cre12.g520150 0.5kb downstream 0.5kb downstream 8239 true chromosome_12: 4340759-4348997 Chlamydomonas reinhardtii
Cre12.g520150 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 4340759-4341258 Chlamydomonas reinhardtii
Cre12.g520150 1.0kb upstream 1.0kb upstream 8739 true chromosome_12: 4341259-4349997 Chlamydomonas reinhardtii
Cre12.g520150 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 4348998-4349997 Chlamydomonas reinhardtii
Cre12.g520150 1.0kb downstream 1.0kb downstream 8739 true chromosome_12: 4340259-4348997 Chlamydomonas reinhardtii
Cre12.g520150 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 4340259-4341258 Chlamydomonas reinhardtii
Cre12.g520150 2.0kb upstream 2.0kb upstream 9739 true chromosome_12: 4341259-4350997 Chlamydomonas reinhardtii
Cre12.g520150 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 4348998-4350997 Chlamydomonas reinhardtii
Cre12.g520150 2.0kb downstream 2.0kb downstream 9739 true chromosome_12: 4339259-4348997 Chlamydomonas reinhardtii
Cre12.g520150 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 4339259-4341258 Chlamydomonas reinhardtii
Cre12.g520150 5.0kb upstream 5.0kb upstream 12739 true chromosome_12: 4341259-4353997 Chlamydomonas reinhardtii
Cre12.g520150 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 4348998-4353997 Chlamydomonas reinhardtii
Cre12.g520150 5.0kb downstream 5.0kb downstream 12739 true chromosome_12: 4336259-4348997 Chlamydomonas reinhardtii
Cre12.g520150 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 4336259-4341258 Chlamydomonas reinhardtii
Cre12.g520150 10.0kb upstream 10.0kb upstream 17739 true chromosome_12: 4341259-4358997 Chlamydomonas reinhardtii
Cre12.g520150 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 4348998-4358997 Chlamydomonas reinhardtii
Cre12.g520150 10.0kb downstream 10.0kb downstream 17739 true chromosome_12: 4331259-4348997 Chlamydomonas reinhardtii
Cre12.g520150 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 4331259-4341258 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109484 5260 Chlorophyte View MSA
123424380 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.693       Low
cufflinks 1.166        
cufflinks 1.247        
cufflinks 1.443        
cufflinks 0.905        
cufflinks 0.935        
cufflinks 1.827        
cufflinks 1.643        
cufflinks 0.735        
cufflinks 0.3       Low
cufflinks 1.707        
cufflinks 1.52        
cufflinks 0.53       Low
cufflinks 0.861        
cufflinks 1.237        
cufflinks 0.965        
cufflinks 1.202        
cufflinks 1.049        
cufflinks 1.269        
cufflinks 4.841       High
cufflinks 1.407        
cufflinks 1.119        
cufflinks 1.722        
cufflinks 2.002       High
cufflinks 1.153        
cufflinks 1.29744 0.0656629 2.52921   Low
cufflinks 3.93401 0.676383 7.19165    
cufflinks 0.891779 0.0 2.24966    
cufflinks 1.99572 0.205634 3.7858    
cufflinks 3.52713 0.538948 6.51531   High

0 Strain