Gene : Cre12.g529850 C. reinhardtii v5.6
Defline:  (1 of 5) PTHR10582 - TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN Genomic Order:  1027
Name:  ? Cre12.g529850 Secondary Identifier:  ? PAC:30793261
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g529850 0.5kb upstream 0.5kb upstream 11790 true chromosome_12: 5385106-5396895 Chlamydomonas reinhardtii
Cre12.g529850 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 5385106-5385605 Chlamydomonas reinhardtii
Cre12.g529850 0.5kb downstream 0.5kb downstream 11790 true chromosome_12: 5385606-5397395 Chlamydomonas reinhardtii
Cre12.g529850 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 5396896-5397395 Chlamydomonas reinhardtii
Cre12.g529850 1.0kb upstream 1.0kb upstream 12290 true chromosome_12: 5384606-5396895 Chlamydomonas reinhardtii
Cre12.g529850 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 5384606-5385605 Chlamydomonas reinhardtii
Cre12.g529850 1.0kb downstream 1.0kb downstream 12290 true chromosome_12: 5385606-5397895 Chlamydomonas reinhardtii
Cre12.g529850 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 5396896-5397895 Chlamydomonas reinhardtii
Cre12.g529850 2.0kb upstream 2.0kb upstream 13290 true chromosome_12: 5383606-5396895 Chlamydomonas reinhardtii
Cre12.g529850 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 5383606-5385605 Chlamydomonas reinhardtii
Cre12.g529850 2.0kb downstream 2.0kb downstream 13290 true chromosome_12: 5385606-5398895 Chlamydomonas reinhardtii
Cre12.g529850 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 5396896-5398895 Chlamydomonas reinhardtii
Cre12.g529850 5.0kb upstream 5.0kb upstream 16290 true chromosome_12: 5380606-5396895 Chlamydomonas reinhardtii
Cre12.g529850 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 5380606-5385605 Chlamydomonas reinhardtii
Cre12.g529850 5.0kb downstream 5.0kb downstream 16290 true chromosome_12: 5385606-5401895 Chlamydomonas reinhardtii
Cre12.g529850 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 5396896-5401895 Chlamydomonas reinhardtii
Cre12.g529850 10.0kb upstream 10.0kb upstream 21290 true chromosome_12: 5375606-5396895 Chlamydomonas reinhardtii
Cre12.g529850 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 5375606-5385605 Chlamydomonas reinhardtii
Cre12.g529850 10.0kb downstream 10.0kb downstream 21290 true chromosome_12: 5385606-5406895 Chlamydomonas reinhardtii
Cre12.g529850 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 5396896-5406895 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081484 5260 Chlorophyte View MSA
123399210 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.312       Low
cufflinks 0.919        
cufflinks 1.941        
cufflinks 2.253       High
cufflinks 1.029        
cufflinks 1.268        
cufflinks 1.447        
cufflinks 2.208        
cufflinks 0.302       Low
cufflinks 0.255       Low
cufflinks 3.241       High
cufflinks 1.663        
cufflinks 0.8        
cufflinks 1.159        
cufflinks 1.15        
cufflinks 0.75        
cufflinks 0.866        
cufflinks 1.566        
cufflinks 0.554        
cufflinks 3.29       High
cufflinks 1.445        
cufflinks 0.548        
cufflinks 1.66        
cufflinks 2.699       High
cufflinks 0.784        
cufflinks 5.57781 0.577382 10.5782    
cufflinks 1.65066 0.242481 3.05883    
cufflinks 3.0268 0.0 6.14293    
cufflinks 1.89015 0.315184 3.46511    
cufflinks 5.27256 1.04045 9.50467    

0 Strain