Gene : NSS3 C. reinhardtii v5.6
Primary Identifier:  ? Cre13.g573900 Defline:  (1 of 1) PTHR11819//PTHR11819:SF159 - SODIUM/SOLUTE SYMPORTER // SUBFAMILY NOT NAMED
Genomic Order:  281 Name:  ? Cre13.g573900
Secondary Identifier:  ? PAC:30784337
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g573900 0.5kb upstream 0.5kb upstream 5079 true chromosome_13: 1650353-1655431 Chlamydomonas reinhardtii
Cre13.g573900 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 1650353-1650852 Chlamydomonas reinhardtii
Cre13.g573900 0.5kb downstream 0.5kb downstream 5079 true chromosome_13: 1650853-1655931 Chlamydomonas reinhardtii
Cre13.g573900 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 1655432-1655931 Chlamydomonas reinhardtii
Cre13.g573900 1.0kb upstream 1.0kb upstream 5579 true chromosome_13: 1649853-1655431 Chlamydomonas reinhardtii
Cre13.g573900 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 1649853-1650852 Chlamydomonas reinhardtii
Cre13.g573900 1.0kb downstream 1.0kb downstream 5579 true chromosome_13: 1650853-1656431 Chlamydomonas reinhardtii
Cre13.g573900 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 1655432-1656431 Chlamydomonas reinhardtii
Cre13.g573900 2.0kb upstream 2.0kb upstream 6579 true chromosome_13: 1648853-1655431 Chlamydomonas reinhardtii
Cre13.g573900 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 1648853-1650852 Chlamydomonas reinhardtii
Cre13.g573900 2.0kb downstream 2.0kb downstream 6579 true chromosome_13: 1650853-1657431 Chlamydomonas reinhardtii
Cre13.g573900 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 1655432-1657431 Chlamydomonas reinhardtii
Cre13.g573900 5.0kb upstream 5.0kb upstream 9579 true chromosome_13: 1645853-1655431 Chlamydomonas reinhardtii
Cre13.g573900 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 1645853-1650852 Chlamydomonas reinhardtii
Cre13.g573900 5.0kb downstream 5.0kb downstream 9579 true chromosome_13: 1650853-1660431 Chlamydomonas reinhardtii
Cre13.g573900 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 1655432-1660431 Chlamydomonas reinhardtii
Cre13.g573900 10.0kb upstream 10.0kb upstream 14579 true chromosome_13: 1640853-1655431 Chlamydomonas reinhardtii
Cre13.g573900 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 1640853-1650852 Chlamydomonas reinhardtii
Cre13.g573900 10.0kb downstream 10.0kb downstream 14579 true chromosome_13: 1650853-1665431 Chlamydomonas reinhardtii
Cre13.g573900 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 1655432-1665431 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110087 5260 Chlorophyte View MSA
123423044 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 70.868     High  
cufflinks 80.866     High  
cufflinks 39.698     High  
cufflinks 51.874     High  
cufflinks 74.278     High  
cufflinks 81.054     High  
cufflinks 31.287     High  
cufflinks 62.916     High  
cufflinks 97.389     High  
cufflinks 22.075     High Low
cufflinks 53.017     High  
cufflinks 96.468     High  
cufflinks 33.186     High  
cufflinks 83.823     High  
cufflinks 67.878     High  
cufflinks 131.832     High High
cufflinks 55.599     High  
cufflinks 49.35     High  
cufflinks 5.201     High Low
cufflinks 24.408     High Low
cufflinks 70.91     High  
cufflinks 63.238     High  
cufflinks 45.964     High  
cufflinks 65.122     High  
cufflinks 55.562     High  
cufflinks 101.543 0.0 208.311 High Low
cufflinks 145.662 21.5569 269.767 High  
cufflinks 33.0371 0.0 67.623 High  
cufflinks 61.8069 0.0 126.372 High Low
cufflinks 144.42 1.38002 287.461 High High

0 Strain