Gene : Cre13.g573050 C. reinhardtii v5.6
Defline:  (1 of 1) K14769 - U3 small nucleolar RNA-associated protein 11 (UTP11) Genomic Order:  264
Name:  ? Cre13.g573050 Secondary Identifier:  ? PAC:30784706
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g573050 0.5kb upstream 0.5kb upstream 3767 true chromosome_13: 1557110-1560876 Chlamydomonas reinhardtii
Cre13.g573050 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 1557110-1557609 Chlamydomonas reinhardtii
Cre13.g573050 0.5kb downstream 0.5kb downstream 3767 true chromosome_13: 1557610-1561376 Chlamydomonas reinhardtii
Cre13.g573050 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 1560877-1561376 Chlamydomonas reinhardtii
Cre13.g573050 1.0kb upstream 1.0kb upstream 4267 true chromosome_13: 1556610-1560876 Chlamydomonas reinhardtii
Cre13.g573050 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 1556610-1557609 Chlamydomonas reinhardtii
Cre13.g573050 1.0kb downstream 1.0kb downstream 4267 true chromosome_13: 1557610-1561876 Chlamydomonas reinhardtii
Cre13.g573050 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 1560877-1561876 Chlamydomonas reinhardtii
Cre13.g573050 2.0kb upstream 2.0kb upstream 5267 true chromosome_13: 1555610-1560876 Chlamydomonas reinhardtii
Cre13.g573050 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 1555610-1557609 Chlamydomonas reinhardtii
Cre13.g573050 2.0kb downstream 2.0kb downstream 5267 true chromosome_13: 1557610-1562876 Chlamydomonas reinhardtii
Cre13.g573050 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 1560877-1562876 Chlamydomonas reinhardtii
Cre13.g573050 5.0kb upstream 5.0kb upstream 8267 true chromosome_13: 1552610-1560876 Chlamydomonas reinhardtii
Cre13.g573050 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 1552610-1557609 Chlamydomonas reinhardtii
Cre13.g573050 5.0kb downstream 5.0kb downstream 8267 true chromosome_13: 1557610-1565876 Chlamydomonas reinhardtii
Cre13.g573050 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 1560877-1565876 Chlamydomonas reinhardtii
Cre13.g573050 10.0kb upstream 10.0kb upstream 13267 true chromosome_13: 1547610-1560876 Chlamydomonas reinhardtii
Cre13.g573050 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 1547610-1557609 Chlamydomonas reinhardtii
Cre13.g573050 10.0kb downstream 10.0kb downstream 13267 true chromosome_13: 1557610-1570876 Chlamydomonas reinhardtii
Cre13.g573050 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 1560877-1570876 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109366 5260 Chlorophyte View MSA
123425029 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.077        
cufflinks 6.823       High
cufflinks 3.493        
cufflinks 4.883        
cufflinks 5.46        
cufflinks 5.579        
cufflinks 5.348        
cufflinks 5.102        
cufflinks 3.498        
cufflinks 1.692       Low
cufflinks 4.897        
cufflinks 5.274        
cufflinks 3.025        
cufflinks 5.796        
cufflinks 4.731        
cufflinks 6.21        
cufflinks 1.652       Low
cufflinks 3.699        
cufflinks 2.503        
cufflinks 6.919       High
cufflinks 4.709        
cufflinks 1.858       Low
cufflinks 5.745        
cufflinks 5.734        
cufflinks 1.337       Low
cufflinks 28.7491 1.98998 55.5082 High High
cufflinks 34.1009 9.01067 59.1912 High High
cufflinks 3.47803 0.0 7.76709    
cufflinks 10.5809 1.69623 19.4655   Low
cufflinks 19.8645 3.91841 35.8106    

0 Strain