Gene : Cre12.g550700 C. reinhardtii v5.6
Defline:  (1 of 1) 2.1.2.2 - Phosphoribosylglycinamide formyltransferase / Glycinamide ribonucleotide transformylase Genomic Order:  1491
Name:  ? Cre12.g550700 Secondary Identifier:  ? PAC:30793240
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-6121 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-6613 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-841 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g550700 0.5kb upstream 0.5kb upstream 2352 true chromosome_12: 8200664-8203015 Chlamydomonas reinhardtii
Cre12.g550700 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 8202516-8203015 Chlamydomonas reinhardtii
Cre12.g550700 0.5kb downstream 0.5kb downstream 2352 true chromosome_12: 8200164-8202515 Chlamydomonas reinhardtii
Cre12.g550700 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 8200164-8200663 Chlamydomonas reinhardtii
Cre12.g550700 1.0kb upstream 1.0kb upstream 2852 true chromosome_12: 8200664-8203515 Chlamydomonas reinhardtii
Cre12.g550700 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 8202516-8203515 Chlamydomonas reinhardtii
Cre12.g550700 1.0kb downstream 1.0kb downstream 2852 true chromosome_12: 8199664-8202515 Chlamydomonas reinhardtii
Cre12.g550700 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 8199664-8200663 Chlamydomonas reinhardtii
Cre12.g550700 2.0kb upstream 2.0kb upstream 3852 true chromosome_12: 8200664-8204515 Chlamydomonas reinhardtii
Cre12.g550700 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 8202516-8204515 Chlamydomonas reinhardtii
Cre12.g550700 2.0kb downstream 2.0kb downstream 3852 true chromosome_12: 8198664-8202515 Chlamydomonas reinhardtii
Cre12.g550700 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 8198664-8200663 Chlamydomonas reinhardtii
Cre12.g550700 5.0kb upstream 5.0kb upstream 6852 true chromosome_12: 8200664-8207515 Chlamydomonas reinhardtii
Cre12.g550700 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 8202516-8207515 Chlamydomonas reinhardtii
Cre12.g550700 5.0kb downstream 5.0kb downstream 6852 true chromosome_12: 8195664-8202515 Chlamydomonas reinhardtii
Cre12.g550700 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 8195664-8200663 Chlamydomonas reinhardtii
Cre12.g550700 10.0kb upstream 10.0kb upstream 11852 true chromosome_12: 8200664-8212515 Chlamydomonas reinhardtii
Cre12.g550700 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 8202516-8212515 Chlamydomonas reinhardtii
Cre12.g550700 10.0kb downstream 10.0kb downstream 11852 true chromosome_12: 8190664-8202515 Chlamydomonas reinhardtii
Cre12.g550700 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 8190664-8200663 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109086 5260 Chlorophyte View MSA
123426469 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.401        
cufflinks 9.743        
cufflinks 5.411        
cufflinks 5.841        
cufflinks 24.847     High High
cufflinks 8.946        
cufflinks 6.13        
cufflinks 7.213        
cufflinks 8.127        
cufflinks 2.98       Low
cufflinks 5.717        
cufflinks 5.775        
cufflinks 4.483        
cufflinks 7.428        
cufflinks 6.443        
cufflinks 12.761     High High
cufflinks 2.125       Low
cufflinks 6.663        
cufflinks 2.07       Low
cufflinks 2.195       Low
cufflinks 6.771        
cufflinks 2.993       Low
cufflinks 5.075        
cufflinks 7.759        
cufflinks 2.452       Low
cufflinks 9.03289 1.52816 16.5376   Low
cufflinks 10.5137 2.71003 18.3175    
cufflinks 4.21143 0.0 9.14153    
cufflinks 6.2487 1.00424 11.4932   Low
cufflinks 13.1331 2.61388 23.6523   High

0 Strain