Gene : Cre13.g589650 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR13471 - TETRATRICOPEPTIDE-LIKE HELICAL Genomic Order:  631
Name:  ? Cre13.g589650 Secondary Identifier:  ? PAC:30784164
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g589650 0.5kb upstream 0.5kb upstream 9246 true chromosome_13: 3768648-3777893 Chlamydomonas reinhardtii
Cre13.g589650 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 3777394-3777893 Chlamydomonas reinhardtii
Cre13.g589650 0.5kb downstream 0.5kb downstream 9246 true chromosome_13: 3768148-3777393 Chlamydomonas reinhardtii
Cre13.g589650 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 3768148-3768647 Chlamydomonas reinhardtii
Cre13.g589650 1.0kb upstream 1.0kb upstream 9746 true chromosome_13: 3768648-3778393 Chlamydomonas reinhardtii
Cre13.g589650 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 3777394-3778393 Chlamydomonas reinhardtii
Cre13.g589650 1.0kb downstream 1.0kb downstream 9746 true chromosome_13: 3767648-3777393 Chlamydomonas reinhardtii
Cre13.g589650 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 3767648-3768647 Chlamydomonas reinhardtii
Cre13.g589650 2.0kb upstream 2.0kb upstream 10746 true chromosome_13: 3768648-3779393 Chlamydomonas reinhardtii
Cre13.g589650 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 3777394-3779393 Chlamydomonas reinhardtii
Cre13.g589650 2.0kb downstream 2.0kb downstream 10746 true chromosome_13: 3766648-3777393 Chlamydomonas reinhardtii
Cre13.g589650 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 3766648-3768647 Chlamydomonas reinhardtii
Cre13.g589650 5.0kb upstream 5.0kb upstream 13746 true chromosome_13: 3768648-3782393 Chlamydomonas reinhardtii
Cre13.g589650 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 3777394-3782393 Chlamydomonas reinhardtii
Cre13.g589650 5.0kb downstream 5.0kb downstream 13746 true chromosome_13: 3763648-3777393 Chlamydomonas reinhardtii
Cre13.g589650 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 3763648-3768647 Chlamydomonas reinhardtii
Cre13.g589650 10.0kb upstream 10.0kb upstream 18746 true chromosome_13: 3768648-3787393 Chlamydomonas reinhardtii
Cre13.g589650 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 3777394-3787393 Chlamydomonas reinhardtii
Cre13.g589650 10.0kb downstream 10.0kb downstream 18746 true chromosome_13: 3758648-3777393 Chlamydomonas reinhardtii
Cre13.g589650 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 3758648-3768647 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112191 5260 Chlorophyte View MSA
123423930 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.336       Low
cufflinks 0.844       High
cufflinks 0.851       High
cufflinks 0.819        
cufflinks 0.657        
cufflinks 0.612        
cufflinks 0.906       High
cufflinks 0.892       High
cufflinks 0.585        
cufflinks 0.33       Low
cufflinks 0.666        
cufflinks 0.776        
cufflinks 0.502        
cufflinks 0.612        
cufflinks 0.608        
cufflinks 0.539        
cufflinks 0.293       Low
cufflinks 0.765        
cufflinks 0.256       Low
cufflinks 0.714        
cufflinks 0.593        
cufflinks 0.455        
cufflinks 0.594        
cufflinks 0.825        
cufflinks 0.539        
cufflinks 1.02561 0.0939721 1.95724   Low
cufflinks 2.63789 0.568114 4.70766    
cufflinks 1.51305 0.0 3.30203    
cufflinks 0.893131 0.0659391 1.72032    
cufflinks 1.24766 0.095562 2.39975    

0 Strain