Gene : Cre13.g602300 C. reinhardtii v5.6
Defline:  (1 of 1) 2.1.1.202 - Multisite-specific tRNA:(cytosine-C(5))-methyltransferase Genomic Order:  716
Name:  ? Cre13.g602300 Secondary Identifier:  ? PAC:30783900
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-6829 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g602300 0.5kb upstream 0.5kb upstream 3794 true chromosome_13: 4487946-4491739 Chlamydomonas reinhardtii
Cre13.g602300 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 4491240-4491739 Chlamydomonas reinhardtii
Cre13.g602300 0.5kb downstream 0.5kb downstream 3794 true chromosome_13: 4487446-4491239 Chlamydomonas reinhardtii
Cre13.g602300 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 4487446-4487945 Chlamydomonas reinhardtii
Cre13.g602300 1.0kb upstream 1.0kb upstream 4294 true chromosome_13: 4487946-4492239 Chlamydomonas reinhardtii
Cre13.g602300 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 4491240-4492239 Chlamydomonas reinhardtii
Cre13.g602300 1.0kb downstream 1.0kb downstream 4294 true chromosome_13: 4486946-4491239 Chlamydomonas reinhardtii
Cre13.g602300 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 4486946-4487945 Chlamydomonas reinhardtii
Cre13.g602300 2.0kb upstream 2.0kb upstream 5294 true chromosome_13: 4487946-4493239 Chlamydomonas reinhardtii
Cre13.g602300 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 4491240-4493239 Chlamydomonas reinhardtii
Cre13.g602300 2.0kb downstream 2.0kb downstream 5294 true chromosome_13: 4485946-4491239 Chlamydomonas reinhardtii
Cre13.g602300 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 4485946-4487945 Chlamydomonas reinhardtii
Cre13.g602300 5.0kb upstream 5.0kb upstream 8294 true chromosome_13: 4487946-4496239 Chlamydomonas reinhardtii
Cre13.g602300 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 4491240-4496239 Chlamydomonas reinhardtii
Cre13.g602300 5.0kb downstream 5.0kb downstream 8294 true chromosome_13: 4482946-4491239 Chlamydomonas reinhardtii
Cre13.g602300 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 4482946-4487945 Chlamydomonas reinhardtii
Cre13.g602300 10.0kb upstream 10.0kb upstream 13294 true chromosome_13: 4487946-4501239 Chlamydomonas reinhardtii
Cre13.g602300 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 4491240-4501239 Chlamydomonas reinhardtii
Cre13.g602300 10.0kb downstream 10.0kb downstream 13294 true chromosome_13: 4477946-4491239 Chlamydomonas reinhardtii
Cre13.g602300 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 4477946-4487945 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124093321 5260 Chlorophyte View MSA
123425870 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.824        
cufflinks 12.339       High
cufflinks 6.428        
cufflinks 8.794        
cufflinks 9.473        
cufflinks 9.338        
cufflinks 10.431        
cufflinks 10.862        
cufflinks 7.755        
cufflinks 3.37       Low
cufflinks 7.335        
cufflinks 11.586       High
cufflinks 5.086       Low
cufflinks 10.522        
cufflinks 8.992        
cufflinks 11.333       High
cufflinks 5.969        
cufflinks 6.603        
cufflinks 4.141       Low
cufflinks 12.114       High
cufflinks 9.642        
cufflinks 6.808        
cufflinks 9.186        
cufflinks 8.442        
cufflinks 6.46        
cufflinks 7.13392 1.2081 13.0597    
cufflinks 13.0031 3.46326 22.543   High
cufflinks 2.3798 0.0 5.47176    
cufflinks 5.8445 0.976452 10.7126    
cufflinks 10.5775 2.12113 19.0339   High

0 Strain