Gene : COPE1 C. reinhardtii v5.6
Primary Identifier:  ? Cre13.g592450 Defline:  (1 of 1) K17268 - coatomer protein complex, subunit epsilon (COPE)
Genomic Order:  688 Name:  ? Cre13.g592450
Secondary Identifier:  ? PAC:30784750
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g592450 0.5kb upstream 0.5kb upstream 3249 true chromosome_13: 4208016-4211264 Chlamydomonas reinhardtii
Cre13.g592450 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 4210765-4211264 Chlamydomonas reinhardtii
Cre13.g592450 0.5kb downstream 0.5kb downstream 3249 true chromosome_13: 4207516-4210764 Chlamydomonas reinhardtii
Cre13.g592450 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 4207516-4208015 Chlamydomonas reinhardtii
Cre13.g592450 1.0kb upstream 1.0kb upstream 3749 true chromosome_13: 4208016-4211764 Chlamydomonas reinhardtii
Cre13.g592450 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 4210765-4211764 Chlamydomonas reinhardtii
Cre13.g592450 1.0kb downstream 1.0kb downstream 3749 true chromosome_13: 4207016-4210764 Chlamydomonas reinhardtii
Cre13.g592450 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 4207016-4208015 Chlamydomonas reinhardtii
Cre13.g592450 2.0kb upstream 2.0kb upstream 4749 true chromosome_13: 4208016-4212764 Chlamydomonas reinhardtii
Cre13.g592450 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 4210765-4212764 Chlamydomonas reinhardtii
Cre13.g592450 2.0kb downstream 2.0kb downstream 4749 true chromosome_13: 4206016-4210764 Chlamydomonas reinhardtii
Cre13.g592450 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 4206016-4208015 Chlamydomonas reinhardtii
Cre13.g592450 5.0kb upstream 5.0kb upstream 7749 true chromosome_13: 4208016-4215764 Chlamydomonas reinhardtii
Cre13.g592450 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 4210765-4215764 Chlamydomonas reinhardtii
Cre13.g592450 5.0kb downstream 5.0kb downstream 7749 true chromosome_13: 4203016-4210764 Chlamydomonas reinhardtii
Cre13.g592450 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 4203016-4208015 Chlamydomonas reinhardtii
Cre13.g592450 10.0kb upstream 10.0kb upstream 12749 true chromosome_13: 4208016-4220764 Chlamydomonas reinhardtii
Cre13.g592450 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 4210765-4220764 Chlamydomonas reinhardtii
Cre13.g592450 10.0kb downstream 10.0kb downstream 12749 true chromosome_13: 4198016-4210764 Chlamydomonas reinhardtii
Cre13.g592450 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 4198016-4208015 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110601 5260 Chlorophyte View MSA
123426837 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 54.393     High  
cufflinks 90.458     High  
cufflinks 92.439     High  
cufflinks 81.991     High  
cufflinks 88.903     High  
cufflinks 91.769     High  
cufflinks 108.056     High High
cufflinks 99.183     High High
cufflinks 55.227     High  
cufflinks 47.569     High Low
cufflinks 56.113     High  
cufflinks 82.851     High  
cufflinks 74.866     High  
cufflinks 90.304     High  
cufflinks 63.832     High  
cufflinks 61.368     High  
cufflinks 46.562     High Low
cufflinks 84.686     High  
cufflinks 29.994     High Low
cufflinks 71.046     High  
cufflinks 68.444     High  
cufflinks 38.64     High Low
cufflinks 93.401     High  
cufflinks 73.423     High  
cufflinks 47.87     High Low
cufflinks 38.4479 1.34824 75.5476 High Low
cufflinks 50.1367 12.3948 87.8785 High  
cufflinks 37.0117 0.0 75.0342 High  
cufflinks 28.191 1.88067 54.5014 High  
cufflinks 57.5718 6.93987 108.204 High High

0 Strain