Gene : Cre13.g592500 C. reinhardtii v5.6
Defline:  (1 of 1) K00953 - FAD synthetase (FLAD1) Genomic Order:  689
Name:  ? Cre13.g592500 Secondary Identifier:  ? PAC:30784539
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii RIBOSYN2-PWY Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g592500 0.5kb upstream 0.5kb upstream 4596 true chromosome_13: 4210819-4215414 Chlamydomonas reinhardtii
Cre13.g592500 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 4214915-4215414 Chlamydomonas reinhardtii
Cre13.g592500 0.5kb downstream 0.5kb downstream 4596 true chromosome_13: 4210319-4214914 Chlamydomonas reinhardtii
Cre13.g592500 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 4210319-4210818 Chlamydomonas reinhardtii
Cre13.g592500 1.0kb upstream 1.0kb upstream 5096 true chromosome_13: 4210819-4215914 Chlamydomonas reinhardtii
Cre13.g592500 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 4214915-4215914 Chlamydomonas reinhardtii
Cre13.g592500 1.0kb downstream 1.0kb downstream 5096 true chromosome_13: 4209819-4214914 Chlamydomonas reinhardtii
Cre13.g592500 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 4209819-4210818 Chlamydomonas reinhardtii
Cre13.g592500 2.0kb upstream 2.0kb upstream 6096 true chromosome_13: 4210819-4216914 Chlamydomonas reinhardtii
Cre13.g592500 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 4214915-4216914 Chlamydomonas reinhardtii
Cre13.g592500 2.0kb downstream 2.0kb downstream 6096 true chromosome_13: 4208819-4214914 Chlamydomonas reinhardtii
Cre13.g592500 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 4208819-4210818 Chlamydomonas reinhardtii
Cre13.g592500 5.0kb upstream 5.0kb upstream 9096 true chromosome_13: 4210819-4219914 Chlamydomonas reinhardtii
Cre13.g592500 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 4214915-4219914 Chlamydomonas reinhardtii
Cre13.g592500 5.0kb downstream 5.0kb downstream 9096 true chromosome_13: 4205819-4214914 Chlamydomonas reinhardtii
Cre13.g592500 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 4205819-4210818 Chlamydomonas reinhardtii
Cre13.g592500 10.0kb upstream 10.0kb upstream 14096 true chromosome_13: 4210819-4224914 Chlamydomonas reinhardtii
Cre13.g592500 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 4214915-4224914 Chlamydomonas reinhardtii
Cre13.g592500 10.0kb downstream 10.0kb downstream 14096 true chromosome_13: 4200819-4214914 Chlamydomonas reinhardtii
Cre13.g592500 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 4200819-4210818 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098340 5260 Chlorophyte View MSA
123427825 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.719        
cufflinks 9.774        
cufflinks 7.423        
cufflinks 12.128        
cufflinks 8.51        
cufflinks 6.245        
cufflinks 7.248        
cufflinks 12.109        
cufflinks 9.316        
cufflinks 1.848       Low
cufflinks 10.01        
cufflinks 10.672        
cufflinks 4.805        
cufflinks 7.458        
cufflinks 8.422        
cufflinks 10.661        
cufflinks 25.952     High High
cufflinks 8.418        
cufflinks 1.818       Low
cufflinks 11.522        
cufflinks 9.051        
cufflinks 20.486     High High
cufflinks 5.748        
cufflinks 12.333        
cufflinks 25.005     High High
cufflinks 2.69834 0.214871 5.18181   Low
cufflinks 4.84714 0.346294 9.34799   Low
cufflinks 25.2787 0.0 50.8492   High
cufflinks 3.48305 0.382568 6.58354    
cufflinks 7.7139 1.35321 14.0746    

0 Strain