Gene : PFP2 C. reinhardtii v5.6
Primary Identifier:  ? Cre13.g576350 Defline:  (1 of 1) K17560 - unconventional prefoldin RPB5 interactor 1 (URI1)
Genomic Order:  334 Name:  ? Cre13.g576350
Secondary Identifier:  ? PAC:30783909
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g576350 0.5kb upstream 0.5kb upstream 2992 true chromosome_13: 1945908-1948899 Chlamydomonas reinhardtii
Cre13.g576350 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 1945908-1946407 Chlamydomonas reinhardtii
Cre13.g576350 0.5kb downstream 0.5kb downstream 2992 true chromosome_13: 1946408-1949399 Chlamydomonas reinhardtii
Cre13.g576350 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 1948900-1949399 Chlamydomonas reinhardtii
Cre13.g576350 1.0kb upstream 1.0kb upstream 3492 true chromosome_13: 1945408-1948899 Chlamydomonas reinhardtii
Cre13.g576350 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 1945408-1946407 Chlamydomonas reinhardtii
Cre13.g576350 1.0kb downstream 1.0kb downstream 3492 true chromosome_13: 1946408-1949899 Chlamydomonas reinhardtii
Cre13.g576350 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 1948900-1949899 Chlamydomonas reinhardtii
Cre13.g576350 2.0kb upstream 2.0kb upstream 4492 true chromosome_13: 1944408-1948899 Chlamydomonas reinhardtii
Cre13.g576350 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 1944408-1946407 Chlamydomonas reinhardtii
Cre13.g576350 2.0kb downstream 2.0kb downstream 4492 true chromosome_13: 1946408-1950899 Chlamydomonas reinhardtii
Cre13.g576350 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 1948900-1950899 Chlamydomonas reinhardtii
Cre13.g576350 5.0kb upstream 5.0kb upstream 7492 true chromosome_13: 1941408-1948899 Chlamydomonas reinhardtii
Cre13.g576350 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 1941408-1946407 Chlamydomonas reinhardtii
Cre13.g576350 5.0kb downstream 5.0kb downstream 7492 true chromosome_13: 1946408-1953899 Chlamydomonas reinhardtii
Cre13.g576350 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 1948900-1953899 Chlamydomonas reinhardtii
Cre13.g576350 10.0kb upstream 10.0kb upstream 12492 true chromosome_13: 1936408-1948899 Chlamydomonas reinhardtii
Cre13.g576350 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 1936408-1946407 Chlamydomonas reinhardtii
Cre13.g576350 10.0kb downstream 10.0kb downstream 12492 true chromosome_13: 1946408-1958899 Chlamydomonas reinhardtii
Cre13.g576350 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 1948900-1958899 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124085849 5260 Chlorophyte View MSA
123425658 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.161       Low
cufflinks 0.664        
cufflinks 0.563        
cufflinks 0.852       High
cufflinks 0.643        
cufflinks 0.612        
cufflinks 0.701        
cufflinks 0.539        
cufflinks 0.303        
cufflinks 0.119       Low
cufflinks 0.831       High
cufflinks 0.55        
cufflinks 0.229        
cufflinks 0.664        
cufflinks 0.457        
cufflinks 0.497        
cufflinks 0.073     Low Low
cufflinks 0.601        
cufflinks 0.167       Low
cufflinks 0.628        
cufflinks 0.569        
cufflinks 0.181       Low
cufflinks 0.525        
cufflinks 0.662        
cufflinks 0.108     Low Low
cufflinks 4.33882 0.66223 8.01541   High
cufflinks 3.373 0.279875 6.46612   High
cufflinks 0.244516 0.0 0.803004 Low Low
cufflinks 1.40021 0.0160066 2.78441   Low
cufflinks 3.13526 0.255683 6.01484    

0 Strain