Gene : PHC24 C. reinhardtii v5.6
Primary Identifier:  ? Cre14.g620702 Defline:  (1 of 70) PF12499 - Pherophorin (DUF3707)
Genomic Order:  298 Name:  ? Cre14.g620702
Secondary Identifier:  ? PAC:30776189
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre14.g620702 0.5kb upstream 0.5kb upstream 4156 true chromosome_14: 1873369-1877524 Chlamydomonas reinhardtii
Cre14.g620702 0.5kb upstream 0.5kb upstream 500 false chromosome_14: 1877025-1877524 Chlamydomonas reinhardtii
Cre14.g620702 0.5kb downstream 0.5kb downstream 4156 true chromosome_14: 1872869-1877024 Chlamydomonas reinhardtii
Cre14.g620702 0.5kb downstream 0.5kb downstream 500 false chromosome_14: 1872869-1873368 Chlamydomonas reinhardtii
Cre14.g620702 1.0kb upstream 1.0kb upstream 4656 true chromosome_14: 1873369-1878024 Chlamydomonas reinhardtii
Cre14.g620702 1.0kb upstream 1.0kb upstream 1000 false chromosome_14: 1877025-1878024 Chlamydomonas reinhardtii
Cre14.g620702 1.0kb downstream 1.0kb downstream 4656 true chromosome_14: 1872369-1877024 Chlamydomonas reinhardtii
Cre14.g620702 1.0kb downstream 1.0kb downstream 1000 false chromosome_14: 1872369-1873368 Chlamydomonas reinhardtii
Cre14.g620702 2.0kb upstream 2.0kb upstream 5656 true chromosome_14: 1873369-1879024 Chlamydomonas reinhardtii
Cre14.g620702 2.0kb upstream 2.0kb upstream 2000 false chromosome_14: 1877025-1879024 Chlamydomonas reinhardtii
Cre14.g620702 2.0kb downstream 2.0kb downstream 5656 true chromosome_14: 1871369-1877024 Chlamydomonas reinhardtii
Cre14.g620702 2.0kb downstream 2.0kb downstream 2000 false chromosome_14: 1871369-1873368 Chlamydomonas reinhardtii
Cre14.g620702 5.0kb upstream 5.0kb upstream 8656 true chromosome_14: 1873369-1882024 Chlamydomonas reinhardtii
Cre14.g620702 5.0kb upstream 5.0kb upstream 5000 false chromosome_14: 1877025-1882024 Chlamydomonas reinhardtii
Cre14.g620702 5.0kb downstream 5.0kb downstream 8656 true chromosome_14: 1868369-1877024 Chlamydomonas reinhardtii
Cre14.g620702 5.0kb downstream 5.0kb downstream 5000 false chromosome_14: 1868369-1873368 Chlamydomonas reinhardtii
Cre14.g620702 10.0kb upstream 10.0kb upstream 13656 true chromosome_14: 1873369-1887024 Chlamydomonas reinhardtii
Cre14.g620702 10.0kb upstream 10.0kb upstream 10000 false chromosome_14: 1877025-1887024 Chlamydomonas reinhardtii
Cre14.g620702 10.0kb downstream 10.0kb downstream 13656 true chromosome_14: 1863369-1877024 Chlamydomonas reinhardtii
Cre14.g620702 10.0kb downstream 10.0kb downstream 10000 false chromosome_14: 1863369-1873368 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124086577 5260 Chlorophyte View MSA
123403906 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 106.984     High  
cufflinks 142.969     High  
cufflinks 39.599     High  
cufflinks 50.577     High  
cufflinks 232.108     High High
cufflinks 138.072     High  
cufflinks 102.586     High  
cufflinks 90.63     High  
cufflinks 170.557     High  
cufflinks 35.712     High  
cufflinks 16.461     High  
cufflinks 76.671     High  
cufflinks 108.055     High  
cufflinks 70.312     High  
cufflinks 99.159     High  
cufflinks 98.924     High  
cufflinks 32.045     High  
cufflinks 96.984     High  
cufflinks 3.254       Low
cufflinks 0.527       Low
cufflinks 90.359     High  
cufflinks 137.861     High  
cufflinks 13.266     High Low
cufflinks 30.796     High  
cufflinks 177.62     High  
cufflinks 84.918 0.0 174.205 High High
cufflinks 292.833 33.8131 551.853 High  
cufflinks 556.316 0.0 1186.6 High High
cufflinks 127.338 0.0 260.41 High High
cufflinks 72.094 3.86528 140.323 High  

0 Strain