Gene : RRP46 C. reinhardtii v5.6
Primary Identifier:  ? Cre14.g624500 Defline:  (1 of 1) K12590 - exosome complex component RRP46 (RRP46, EXOSC5)
Genomic Order:  375 Name:  ? Cre14.g624500
Secondary Identifier:  ? PAC:30776773
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre14.g624500 0.5kb upstream 0.5kb upstream 2970 true chromosome_14: 2412863-2415832 Chlamydomonas reinhardtii
Cre14.g624500 0.5kb upstream 0.5kb upstream 500 false chromosome_14: 2412863-2413362 Chlamydomonas reinhardtii
Cre14.g624500 0.5kb downstream 0.5kb downstream 2970 true chromosome_14: 2413363-2416332 Chlamydomonas reinhardtii
Cre14.g624500 0.5kb downstream 0.5kb downstream 500 false chromosome_14: 2415833-2416332 Chlamydomonas reinhardtii
Cre14.g624500 1.0kb upstream 1.0kb upstream 3470 true chromosome_14: 2412363-2415832 Chlamydomonas reinhardtii
Cre14.g624500 1.0kb upstream 1.0kb upstream 1000 false chromosome_14: 2412363-2413362 Chlamydomonas reinhardtii
Cre14.g624500 1.0kb downstream 1.0kb downstream 3470 true chromosome_14: 2413363-2416832 Chlamydomonas reinhardtii
Cre14.g624500 1.0kb downstream 1.0kb downstream 1000 false chromosome_14: 2415833-2416832 Chlamydomonas reinhardtii
Cre14.g624500 2.0kb upstream 2.0kb upstream 4470 true chromosome_14: 2411363-2415832 Chlamydomonas reinhardtii
Cre14.g624500 2.0kb upstream 2.0kb upstream 2000 false chromosome_14: 2411363-2413362 Chlamydomonas reinhardtii
Cre14.g624500 2.0kb downstream 2.0kb downstream 4470 true chromosome_14: 2413363-2417832 Chlamydomonas reinhardtii
Cre14.g624500 2.0kb downstream 2.0kb downstream 2000 false chromosome_14: 2415833-2417832 Chlamydomonas reinhardtii
Cre14.g624500 5.0kb upstream 5.0kb upstream 7470 true chromosome_14: 2408363-2415832 Chlamydomonas reinhardtii
Cre14.g624500 5.0kb upstream 5.0kb upstream 5000 false chromosome_14: 2408363-2413362 Chlamydomonas reinhardtii
Cre14.g624500 5.0kb downstream 5.0kb downstream 7470 true chromosome_14: 2413363-2420832 Chlamydomonas reinhardtii
Cre14.g624500 5.0kb downstream 5.0kb downstream 5000 false chromosome_14: 2415833-2420832 Chlamydomonas reinhardtii
Cre14.g624500 10.0kb upstream 10.0kb upstream 12470 true chromosome_14: 2403363-2415832 Chlamydomonas reinhardtii
Cre14.g624500 10.0kb upstream 10.0kb upstream 10000 false chromosome_14: 2403363-2413362 Chlamydomonas reinhardtii
Cre14.g624500 10.0kb downstream 10.0kb downstream 12470 true chromosome_14: 2413363-2425832 Chlamydomonas reinhardtii
Cre14.g624500 10.0kb downstream 10.0kb downstream 10000 false chromosome_14: 2415833-2425832 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111340 5260 Chlorophyte View MSA
123426253 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.134        
cufflinks 5.728       High
cufflinks 2.985        
cufflinks 3.978        
cufflinks 4.139        
cufflinks 4.157        
cufflinks 4.452        
cufflinks 4.673        
cufflinks 3.488        
cufflinks 1.613       Low
cufflinks 2.959        
cufflinks 3.904        
cufflinks 2.532       Low
cufflinks 4.448        
cufflinks 3.961        
cufflinks 4.583        
cufflinks 3.259        
cufflinks 3.415        
cufflinks 1.485       Low
cufflinks 4.493        
cufflinks 3.662        
cufflinks 2.811        
cufflinks 4.328        
cufflinks 4.288        
cufflinks 2.478       Low
cufflinks 14.3455 2.35011 26.341   High
cufflinks 18.4516 4.9144 31.9887    
cufflinks 3.71155 0.0 8.5958   Low
cufflinks 8.39649 1.33191 15.4611   Low
cufflinks 16.1161 3.23179 29.0004   High

0 Strain