Gene : Cre15.g640600 C. reinhardtii v5.6
Defline:  (1 of 1) PF00775 - Dioxygenase (Dioxygenase_C) Genomic Order:  91
Name:  ? Cre15.g640600 Secondary Identifier:  ? PAC:30783617
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre15.g640600 0.5kb upstream 0.5kb upstream 4359 true chromosome_15: 709076-713434 Chlamydomonas reinhardtii
Cre15.g640600 0.5kb upstream 0.5kb upstream 500 false chromosome_15: 712935-713434 Chlamydomonas reinhardtii
Cre15.g640600 0.5kb downstream 0.5kb downstream 4359 true chromosome_15: 708576-712934 Chlamydomonas reinhardtii
Cre15.g640600 0.5kb downstream 0.5kb downstream 500 false chromosome_15: 708576-709075 Chlamydomonas reinhardtii
Cre15.g640600 1.0kb upstream 1.0kb upstream 4859 true chromosome_15: 709076-713934 Chlamydomonas reinhardtii
Cre15.g640600 1.0kb upstream 1.0kb upstream 1000 false chromosome_15: 712935-713934 Chlamydomonas reinhardtii
Cre15.g640600 1.0kb downstream 1.0kb downstream 4859 true chromosome_15: 708076-712934 Chlamydomonas reinhardtii
Cre15.g640600 1.0kb downstream 1.0kb downstream 1000 false chromosome_15: 708076-709075 Chlamydomonas reinhardtii
Cre15.g640600 2.0kb upstream 2.0kb upstream 5859 true chromosome_15: 709076-714934 Chlamydomonas reinhardtii
Cre15.g640600 2.0kb upstream 2.0kb upstream 2000 false chromosome_15: 712935-714934 Chlamydomonas reinhardtii
Cre15.g640600 2.0kb downstream 2.0kb downstream 5859 true chromosome_15: 707076-712934 Chlamydomonas reinhardtii
Cre15.g640600 2.0kb downstream 2.0kb downstream 2000 false chromosome_15: 707076-709075 Chlamydomonas reinhardtii
Cre15.g640600 5.0kb upstream 5.0kb upstream 8859 true chromosome_15: 709076-717934 Chlamydomonas reinhardtii
Cre15.g640600 5.0kb upstream 5.0kb upstream 5000 false chromosome_15: 712935-717934 Chlamydomonas reinhardtii
Cre15.g640600 5.0kb downstream 5.0kb downstream 8859 true chromosome_15: 704076-712934 Chlamydomonas reinhardtii
Cre15.g640600 5.0kb downstream 5.0kb downstream 5000 false chromosome_15: 704076-709075 Chlamydomonas reinhardtii
Cre15.g640600 10.0kb upstream 10.0kb upstream 13859 true chromosome_15: 709076-722934 Chlamydomonas reinhardtii
Cre15.g640600 10.0kb upstream 10.0kb upstream 10000 false chromosome_15: 712935-722934 Chlamydomonas reinhardtii
Cre15.g640600 10.0kb downstream 10.0kb downstream 13859 true chromosome_15: 699076-712934 Chlamydomonas reinhardtii
Cre15.g640600 10.0kb downstream 10.0kb downstream 10000 false chromosome_15: 699076-709075 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124079086 5260 Chlorophyte Singleton cluster - no MSA
123396973 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.023     Low Low
cufflinks 0.536        
cufflinks 0.305        
cufflinks 0.286        
cufflinks 0.527        
cufflinks 0.776        
cufflinks 1.315       High
cufflinks 0.416        
cufflinks 0.07     Low Low
cufflinks 0.312        
cufflinks 0.119     Low Low
cufflinks 0.655        
cufflinks 0.696        
cufflinks 0.702        
cufflinks 0.636        
cufflinks 0.037     Low Low
cufflinks 0.189        
cufflinks 0.526        
cufflinks 0.372        
cufflinks 0.746        
cufflinks 0.864        
cufflinks 0.43        
cufflinks 0.386        
cufflinks 0.263        
cufflinks 0.346        
cufflinks 1.41278E-4 0.0 0.0056996 Low Low
cufflinks 0.602558 0.0 1.56175    
cufflinks 3.75575 0.0 8.42752   High
cufflinks 0.301392 0.0 0.69019    
cufflinks 9.23691 1.65839 16.8154   High

0 Strain