Gene : PETN C. reinhardtii v5.6
Primary Identifier:  ? Cre16.g650100 Defline:  (1 of 1) K03689 - cytochrome b6-f complex subunit 8 (petN)
Genomic Order:  184 Name:  ? Cre16.g650100
Secondary Identifier:  ? PAC:30778201
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PHOTOALL-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-101 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7731 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g650100 0.5kb upstream 0.5kb upstream 2091 true chromosome_16: 1133146-1135236 Chlamydomonas reinhardtii
Cre16.g650100 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 1133146-1133645 Chlamydomonas reinhardtii
Cre16.g650100 0.5kb downstream 0.5kb downstream 2091 true chromosome_16: 1133646-1135736 Chlamydomonas reinhardtii
Cre16.g650100 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 1135237-1135736 Chlamydomonas reinhardtii
Cre16.g650100 1.0kb upstream 1.0kb upstream 2591 true chromosome_16: 1132646-1135236 Chlamydomonas reinhardtii
Cre16.g650100 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 1132646-1133645 Chlamydomonas reinhardtii
Cre16.g650100 1.0kb downstream 1.0kb downstream 2591 true chromosome_16: 1133646-1136236 Chlamydomonas reinhardtii
Cre16.g650100 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 1135237-1136236 Chlamydomonas reinhardtii
Cre16.g650100 2.0kb upstream 2.0kb upstream 3591 true chromosome_16: 1131646-1135236 Chlamydomonas reinhardtii
Cre16.g650100 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 1131646-1133645 Chlamydomonas reinhardtii
Cre16.g650100 2.0kb downstream 2.0kb downstream 3591 true chromosome_16: 1133646-1137236 Chlamydomonas reinhardtii
Cre16.g650100 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 1135237-1137236 Chlamydomonas reinhardtii
Cre16.g650100 5.0kb upstream 5.0kb upstream 6591 true chromosome_16: 1128646-1135236 Chlamydomonas reinhardtii
Cre16.g650100 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 1128646-1133645 Chlamydomonas reinhardtii
Cre16.g650100 5.0kb downstream 5.0kb downstream 6591 true chromosome_16: 1133646-1140236 Chlamydomonas reinhardtii
Cre16.g650100 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 1135237-1140236 Chlamydomonas reinhardtii
Cre16.g650100 10.0kb upstream 10.0kb upstream 11591 true chromosome_16: 1123646-1135236 Chlamydomonas reinhardtii
Cre16.g650100 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 1123646-1133645 Chlamydomonas reinhardtii
Cre16.g650100 10.0kb downstream 10.0kb downstream 11591 true chromosome_16: 1133646-1145236 Chlamydomonas reinhardtii
Cre16.g650100 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 1135237-1145236 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110337 5260 Chlorophyte View MSA
123427633 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1316.65     High High
cufflinks 748.314     High  
cufflinks 601.756     High  
cufflinks 526.428     High  
cufflinks 732.253     High  
cufflinks 751.117     High  
cufflinks 359.286     High Low
cufflinks 630.562     High  
cufflinks 1346.48     High High
cufflinks 1053.97     High  
cufflinks 304.698     High Low
cufflinks 582.772     High  
cufflinks 937.432     High  
cufflinks 673.524     High  
cufflinks 696.824     High  
cufflinks 1012.41     High  
cufflinks 1242.02     High High
cufflinks 693.623     High  
cufflinks 866.493     High  
cufflinks 363.827     High Low
cufflinks 774.884     High  
cufflinks 1256.94     High High
cufflinks 406.704     High Low
cufflinks 533.27     High  
cufflinks 1159.76     High High
cufflinks 1214.18 58.6201 2369.73 High High
cufflinks 923.697 108.177 1739.22 High  
cufflinks 1322.52 0.0 2813.61 High  
cufflinks 625.778 0.0 1265.57 High  
cufflinks 436.907 5.56179 868.252 High Low

0 Strain