Gene : SRR3 C. reinhardtii v5.6
Primary Identifier:  ? Cre16.g654950 Defline:  (1 of 20) PTHR19862:SF14 - WD REPEAT-CONTAINING PROTEIN 48
Genomic Order:  286 Name:  ? Cre16.g654950
Secondary Identifier:  ? PAC:30778203
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g654950 0.5kb upstream 0.5kb upstream 25156 true chromosome_16: 1735651-1760806 Chlamydomonas reinhardtii
Cre16.g654950 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 1760307-1760806 Chlamydomonas reinhardtii
Cre16.g654950 0.5kb downstream 0.5kb downstream 25156 true chromosome_16: 1735151-1760306 Chlamydomonas reinhardtii
Cre16.g654950 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 1735151-1735650 Chlamydomonas reinhardtii
Cre16.g654950 1.0kb upstream 1.0kb upstream 25656 true chromosome_16: 1735651-1761306 Chlamydomonas reinhardtii
Cre16.g654950 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 1760307-1761306 Chlamydomonas reinhardtii
Cre16.g654950 1.0kb downstream 1.0kb downstream 25656 true chromosome_16: 1734651-1760306 Chlamydomonas reinhardtii
Cre16.g654950 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 1734651-1735650 Chlamydomonas reinhardtii
Cre16.g654950 2.0kb upstream 2.0kb upstream 26656 true chromosome_16: 1735651-1762306 Chlamydomonas reinhardtii
Cre16.g654950 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 1760307-1762306 Chlamydomonas reinhardtii
Cre16.g654950 2.0kb downstream 2.0kb downstream 26656 true chromosome_16: 1733651-1760306 Chlamydomonas reinhardtii
Cre16.g654950 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 1733651-1735650 Chlamydomonas reinhardtii
Cre16.g654950 5.0kb upstream 5.0kb upstream 29656 true chromosome_16: 1735651-1765306 Chlamydomonas reinhardtii
Cre16.g654950 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 1760307-1765306 Chlamydomonas reinhardtii
Cre16.g654950 5.0kb downstream 5.0kb downstream 29656 true chromosome_16: 1730651-1760306 Chlamydomonas reinhardtii
Cre16.g654950 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 1730651-1735650 Chlamydomonas reinhardtii
Cre16.g654950 10.0kb upstream 10.0kb upstream 34656 true chromosome_16: 1735651-1770306 Chlamydomonas reinhardtii
Cre16.g654950 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 1760307-1770306 Chlamydomonas reinhardtii
Cre16.g654950 10.0kb downstream 10.0kb downstream 34656 true chromosome_16: 1725651-1760306 Chlamydomonas reinhardtii
Cre16.g654950 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 1725651-1735650 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124077259 5260 Chlorophyte View MSA
123395279 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.008     Low Low
cufflinks 0.078     Low  
cufflinks 0.066     Low  
cufflinks 0.032     Low  
cufflinks 0.054     Low  
cufflinks 0.098     Low  
cufflinks 0.073     Low  
cufflinks 0.051     Low  
cufflinks 0.009     Low Low
cufflinks 0.033     Low  
cufflinks 0.067     Low  
cufflinks 0.128     Low  
cufflinks 0.068     Low  
cufflinks 0.088     Low  
cufflinks 0.046     Low  
cufflinks 0.026     Low  
cufflinks 0.117     Low  
cufflinks 0.081     Low  
cufflinks 0.145       High
cufflinks 0.306       High
cufflinks 0.072     Low  
cufflinks 0.02     Low Low
cufflinks 0.371       High
cufflinks 0.047     Low  
cufflinks 0.041     Low  
cufflinks 0.282127 0.0136038 0.55065    
cufflinks 1.37399 0.331883 2.4161    
cufflinks 1.7441 0.0 3.52172    
cufflinks 0.565433 0.0754157 1.05545    
cufflinks 1.86878 0.375347 3.3622    

0 Strain