Gene : Cre16.g654992 C. reinhardtii v5.6
Defline:  (1 of 1) 2.1.1.225 - tRNA:m(4)X modification enzyme Genomic Order:  287
Name:  ? Cre16.g654992 Secondary Identifier:  ? PAC:30776867
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-6829 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g654992 0.5kb upstream 0.5kb upstream 4726 true chromosome_16: 1760401-1765126 Chlamydomonas reinhardtii
Cre16.g654992 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 1764627-1765126 Chlamydomonas reinhardtii
Cre16.g654992 0.5kb downstream 0.5kb downstream 4726 true chromosome_16: 1759901-1764626 Chlamydomonas reinhardtii
Cre16.g654992 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 1759901-1760400 Chlamydomonas reinhardtii
Cre16.g654992 1.0kb upstream 1.0kb upstream 5226 true chromosome_16: 1760401-1765626 Chlamydomonas reinhardtii
Cre16.g654992 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 1764627-1765626 Chlamydomonas reinhardtii
Cre16.g654992 1.0kb downstream 1.0kb downstream 5226 true chromosome_16: 1759401-1764626 Chlamydomonas reinhardtii
Cre16.g654992 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 1759401-1760400 Chlamydomonas reinhardtii
Cre16.g654992 2.0kb upstream 2.0kb upstream 6226 true chromosome_16: 1760401-1766626 Chlamydomonas reinhardtii
Cre16.g654992 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 1764627-1766626 Chlamydomonas reinhardtii
Cre16.g654992 2.0kb downstream 2.0kb downstream 6226 true chromosome_16: 1758401-1764626 Chlamydomonas reinhardtii
Cre16.g654992 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 1758401-1760400 Chlamydomonas reinhardtii
Cre16.g654992 5.0kb upstream 5.0kb upstream 9226 true chromosome_16: 1760401-1769626 Chlamydomonas reinhardtii
Cre16.g654992 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 1764627-1769626 Chlamydomonas reinhardtii
Cre16.g654992 5.0kb downstream 5.0kb downstream 9226 true chromosome_16: 1755401-1764626 Chlamydomonas reinhardtii
Cre16.g654992 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 1755401-1760400 Chlamydomonas reinhardtii
Cre16.g654992 10.0kb upstream 10.0kb upstream 14226 true chromosome_16: 1760401-1774626 Chlamydomonas reinhardtii
Cre16.g654992 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 1764627-1774626 Chlamydomonas reinhardtii
Cre16.g654992 10.0kb downstream 10.0kb downstream 14226 true chromosome_16: 1750401-1764626 Chlamydomonas reinhardtii
Cre16.g654992 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 1750401-1760400 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112685 5260 Chlorophyte View MSA
123424709 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.603        
cufflinks 1.311       High
cufflinks 0.477       Low
cufflinks 0.545        
cufflinks 0.864        
cufflinks 0.711        
cufflinks 1.381       High
cufflinks 0.902        
cufflinks 0.932        
cufflinks 0.236       Low
cufflinks 0.513        
cufflinks 0.975        
cufflinks 0.352       Low
cufflinks 0.827        
cufflinks 0.825        
cufflinks 0.841        
cufflinks 1.032        
cufflinks 0.52        
cufflinks 0.407       Low
cufflinks 1.683       High
cufflinks 0.899        
cufflinks 1.179        
cufflinks 0.915        
cufflinks 0.79        
cufflinks 1.153        
cufflinks 1.93164 0.168423 3.69486   High
cufflinks 4.32607 0.740397 7.91174    
cufflinks 0.302721 0.0 0.920523 Low Low
cufflinks 1.55829 0.0927884 3.0238    
cufflinks 1.61288 0.0426625 3.18311   Low

0 Strain