Gene : Cre16.g686200 C. reinhardtii v5.6
Defline:  (1 of 2) K16055 - trehalose 6-phosphate synthase/phosphatase (TPS) Genomic Order:  799
Name:  ? Cre16.g686200 Secondary Identifier:  ? PAC:30777052
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g686200 0.5kb upstream 0.5kb upstream 16372 true chromosome_16: 4818046-4834417 Chlamydomonas reinhardtii
Cre16.g686200 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 4818046-4818545 Chlamydomonas reinhardtii
Cre16.g686200 0.5kb downstream 0.5kb downstream 16372 true chromosome_16: 4818546-4834917 Chlamydomonas reinhardtii
Cre16.g686200 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 4834418-4834917 Chlamydomonas reinhardtii
Cre16.g686200 1.0kb upstream 1.0kb upstream 16872 true chromosome_16: 4817546-4834417 Chlamydomonas reinhardtii
Cre16.g686200 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 4817546-4818545 Chlamydomonas reinhardtii
Cre16.g686200 1.0kb downstream 1.0kb downstream 16872 true chromosome_16: 4818546-4835417 Chlamydomonas reinhardtii
Cre16.g686200 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 4834418-4835417 Chlamydomonas reinhardtii
Cre16.g686200 2.0kb upstream 2.0kb upstream 17872 true chromosome_16: 4816546-4834417 Chlamydomonas reinhardtii
Cre16.g686200 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 4816546-4818545 Chlamydomonas reinhardtii
Cre16.g686200 2.0kb downstream 2.0kb downstream 17872 true chromosome_16: 4818546-4836417 Chlamydomonas reinhardtii
Cre16.g686200 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 4834418-4836417 Chlamydomonas reinhardtii
Cre16.g686200 5.0kb upstream 5.0kb upstream 20872 true chromosome_16: 4813546-4834417 Chlamydomonas reinhardtii
Cre16.g686200 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 4813546-4818545 Chlamydomonas reinhardtii
Cre16.g686200 5.0kb downstream 5.0kb downstream 20872 true chromosome_16: 4818546-4839417 Chlamydomonas reinhardtii
Cre16.g686200 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 4834418-4839417 Chlamydomonas reinhardtii
Cre16.g686200 10.0kb upstream 10.0kb upstream 25872 true chromosome_16: 4808546-4834417 Chlamydomonas reinhardtii
Cre16.g686200 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 4808546-4818545 Chlamydomonas reinhardtii
Cre16.g686200 10.0kb downstream 10.0kb downstream 25872 true chromosome_16: 4818546-4844417 Chlamydomonas reinhardtii
Cre16.g686200 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 4834418-4844417 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112384 5260 Chlorophyte View MSA
123428106 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.731        
cufflinks 1.279        
cufflinks 1.508        
cufflinks 1.727        
cufflinks 1.08        
cufflinks 1.03        
cufflinks 1.38        
cufflinks 1.544        
cufflinks 0.841        
cufflinks 0.29       Low
cufflinks 1.808       High
cufflinks 1.568        
cufflinks 0.481       Low
cufflinks 1.036        
cufflinks 1.293        
cufflinks 0.869        
cufflinks 1.452        
cufflinks 1.275        
cufflinks 0.289       Low
cufflinks 1.846       High
cufflinks 1.428        
cufflinks 1.289        
cufflinks 0.994        
cufflinks 1.6        
cufflinks 1.334        
cufflinks 1.54292 0.217879 2.86797   Low
cufflinks 6.66673 1.81576 11.5177   High
cufflinks 4.02851 0.0 8.15778    
cufflinks 3.70718 0.569594 6.84477   High
cufflinks 3.77994 0.754315 6.80556    

0 Strain