Gene : ALD8 C. reinhardtii v5.6
Primary Identifier:  ? Cre16.g675650 Defline:  (1 of 1) 1.2.1.27 - Methylmalonate-semialdehyde dehydrogenase (CoA acylating) / MSDH
Genomic Order:  1025 Name:  ? Cre16.g675650
Secondary Identifier:  ? PAC:30777413
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii VALDEG-PWY Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g675650 0.5kb upstream 0.5kb upstream 5646 true chromosome_16: 6130832-6136477 Chlamydomonas reinhardtii
Cre16.g675650 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 6130832-6131331 Chlamydomonas reinhardtii
Cre16.g675650 0.5kb downstream 0.5kb downstream 5646 true chromosome_16: 6131332-6136977 Chlamydomonas reinhardtii
Cre16.g675650 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 6136478-6136977 Chlamydomonas reinhardtii
Cre16.g675650 1.0kb upstream 1.0kb upstream 6146 true chromosome_16: 6130332-6136477 Chlamydomonas reinhardtii
Cre16.g675650 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 6130332-6131331 Chlamydomonas reinhardtii
Cre16.g675650 1.0kb downstream 1.0kb downstream 6146 true chromosome_16: 6131332-6137477 Chlamydomonas reinhardtii
Cre16.g675650 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 6136478-6137477 Chlamydomonas reinhardtii
Cre16.g675650 2.0kb upstream 2.0kb upstream 7146 true chromosome_16: 6129332-6136477 Chlamydomonas reinhardtii
Cre16.g675650 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 6129332-6131331 Chlamydomonas reinhardtii
Cre16.g675650 2.0kb downstream 2.0kb downstream 7146 true chromosome_16: 6131332-6138477 Chlamydomonas reinhardtii
Cre16.g675650 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 6136478-6138477 Chlamydomonas reinhardtii
Cre16.g675650 5.0kb upstream 5.0kb upstream 10146 true chromosome_16: 6126332-6136477 Chlamydomonas reinhardtii
Cre16.g675650 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 6126332-6131331 Chlamydomonas reinhardtii
Cre16.g675650 5.0kb downstream 5.0kb downstream 10146 true chromosome_16: 6131332-6141477 Chlamydomonas reinhardtii
Cre16.g675650 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 6136478-6141477 Chlamydomonas reinhardtii
Cre16.g675650 10.0kb upstream 10.0kb upstream 15146 true chromosome_16: 6121332-6136477 Chlamydomonas reinhardtii
Cre16.g675650 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 6121332-6131331 Chlamydomonas reinhardtii
Cre16.g675650 10.0kb downstream 10.0kb downstream 15146 true chromosome_16: 6131332-6146477 Chlamydomonas reinhardtii
Cre16.g675650 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 6136478-6146477 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098185 5260 Chlorophyte View MSA
123424668 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.038     High  
cufflinks 55.872     High High
cufflinks 36.823     High  
cufflinks 10.742        
cufflinks 49.334     High High
cufflinks 38.037     High  
cufflinks 46.977     High High
cufflinks 13.219        
cufflinks 29.535     High  
cufflinks 16.206     High  
cufflinks 11.053        
cufflinks 10.231       Low
cufflinks 28.809     High  
cufflinks 43.854     High High
cufflinks 7.997       Low
cufflinks 22.216     High  
cufflinks 43.487     High High
cufflinks 31.619     High  
cufflinks 4.94       Low
cufflinks 28.827     High  
cufflinks 6.761       Low
cufflinks 24.209     High  
cufflinks 10.931        
cufflinks 16.51     High  
cufflinks 38.505     High  
cufflinks 48.6487 0.0 97.9574 High High
cufflinks 113.492 21.1184 205.866 High  
cufflinks 161.422 0.0 338.95 High High
cufflinks 104.501 0.0 214.263 High High
cufflinks 78.594 5.5076 151.68 High  

0 Strain