Gene : LIC1 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g705050 Defline:  (1 of 4) PTHR18945//PTHR18945:SF222 - NEUROTRANSMITTER GATED ION CHANNEL // SUBFAMILY NOT NAMED
Genomic Order:  201 Name:  ? Cre17.g705050
Secondary Identifier:  ? PAC:30782866
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g705050 0.5kb upstream 0.5kb upstream 8289 true chromosome_17: 1214419-1222707 Chlamydomonas reinhardtii
Cre17.g705050 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 1214419-1214918 Chlamydomonas reinhardtii
Cre17.g705050 0.5kb downstream 0.5kb downstream 8289 true chromosome_17: 1214919-1223207 Chlamydomonas reinhardtii
Cre17.g705050 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 1222708-1223207 Chlamydomonas reinhardtii
Cre17.g705050 1.0kb upstream 1.0kb upstream 8789 true chromosome_17: 1213919-1222707 Chlamydomonas reinhardtii
Cre17.g705050 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 1213919-1214918 Chlamydomonas reinhardtii
Cre17.g705050 1.0kb downstream 1.0kb downstream 8789 true chromosome_17: 1214919-1223707 Chlamydomonas reinhardtii
Cre17.g705050 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 1222708-1223707 Chlamydomonas reinhardtii
Cre17.g705050 2.0kb upstream 2.0kb upstream 9789 true chromosome_17: 1212919-1222707 Chlamydomonas reinhardtii
Cre17.g705050 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 1212919-1214918 Chlamydomonas reinhardtii
Cre17.g705050 2.0kb downstream 2.0kb downstream 9789 true chromosome_17: 1214919-1224707 Chlamydomonas reinhardtii
Cre17.g705050 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 1222708-1224707 Chlamydomonas reinhardtii
Cre17.g705050 5.0kb upstream 5.0kb upstream 12789 true chromosome_17: 1209919-1222707 Chlamydomonas reinhardtii
Cre17.g705050 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 1209919-1214918 Chlamydomonas reinhardtii
Cre17.g705050 5.0kb downstream 5.0kb downstream 12789 true chromosome_17: 1214919-1227707 Chlamydomonas reinhardtii
Cre17.g705050 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 1222708-1227707 Chlamydomonas reinhardtii
Cre17.g705050 10.0kb upstream 10.0kb upstream 17789 true chromosome_17: 1204919-1222707 Chlamydomonas reinhardtii
Cre17.g705050 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 1204919-1214918 Chlamydomonas reinhardtii
Cre17.g705050 10.0kb downstream 10.0kb downstream 17789 true chromosome_17: 1214919-1232707 Chlamydomonas reinhardtii
Cre17.g705050 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 1222708-1232707 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124080361 5260 Chlorophyte View MSA
123398148 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.002     Low Low
cufflinks 0.061     Low  
cufflinks 0.055     Low  
cufflinks 0.197        
cufflinks 0.051     Low  
cufflinks 0.066     Low  
cufflinks 0.113     Low  
cufflinks 0.238       High
cufflinks 0.008     Low Low
cufflinks 0.02     Low Low
cufflinks 0.1     Low  
cufflinks 0.191     Low  
cufflinks 0.043     Low  
cufflinks 0.076     Low  
cufflinks 0.086     Low  
cufflinks 0.074     Low  
cufflinks 0.037     Low  
cufflinks 0.073     Low  
cufflinks 0.04     Low  
cufflinks 0.721       High
cufflinks 0.154     Low  
cufflinks 0.04     Low  
cufflinks 0.109     Low  
cufflinks 0.236       High
cufflinks 0.032     Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.128223 0.0 0.374012 Low  
cufflinks 0.279812 0.0 0.808684 Low  
cufflinks 0.116578 0.0 0.268806 Low  
cufflinks 0.315721 0.0 0.7271 Low  

0 Strain