Gene : Cre17.g706200 C. reinhardtii v5.6
Defline:  (1 of 3) PF02932 - Neurotransmitter-gated ion-channel transmembrane region (Neur_chan_memb) Genomic Order:  227
Name:  ? Cre17.g706200 Secondary Identifier:  ? PAC:30781824
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g706200 0.5kb upstream 0.5kb upstream 3712 true chromosome_17: 1370221-1373932 Chlamydomonas reinhardtii
Cre17.g706200 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 1370221-1370720 Chlamydomonas reinhardtii
Cre17.g706200 0.5kb downstream 0.5kb downstream 3712 true chromosome_17: 1370721-1374432 Chlamydomonas reinhardtii
Cre17.g706200 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 1373933-1374432 Chlamydomonas reinhardtii
Cre17.g706200 1.0kb upstream 1.0kb upstream 4212 true chromosome_17: 1369721-1373932 Chlamydomonas reinhardtii
Cre17.g706200 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 1369721-1370720 Chlamydomonas reinhardtii
Cre17.g706200 1.0kb downstream 1.0kb downstream 4212 true chromosome_17: 1370721-1374932 Chlamydomonas reinhardtii
Cre17.g706200 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 1373933-1374932 Chlamydomonas reinhardtii
Cre17.g706200 2.0kb upstream 2.0kb upstream 5212 true chromosome_17: 1368721-1373932 Chlamydomonas reinhardtii
Cre17.g706200 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 1368721-1370720 Chlamydomonas reinhardtii
Cre17.g706200 2.0kb downstream 2.0kb downstream 5212 true chromosome_17: 1370721-1375932 Chlamydomonas reinhardtii
Cre17.g706200 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 1373933-1375932 Chlamydomonas reinhardtii
Cre17.g706200 5.0kb upstream 5.0kb upstream 8212 true chromosome_17: 1365721-1373932 Chlamydomonas reinhardtii
Cre17.g706200 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 1365721-1370720 Chlamydomonas reinhardtii
Cre17.g706200 5.0kb downstream 5.0kb downstream 8212 true chromosome_17: 1370721-1378932 Chlamydomonas reinhardtii
Cre17.g706200 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 1373933-1378932 Chlamydomonas reinhardtii
Cre17.g706200 10.0kb upstream 10.0kb upstream 13212 true chromosome_17: 1360721-1373932 Chlamydomonas reinhardtii
Cre17.g706200 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 1360721-1370720 Chlamydomonas reinhardtii
Cre17.g706200 10.0kb downstream 10.0kb downstream 13212 true chromosome_17: 1370721-1383932 Chlamydomonas reinhardtii
Cre17.g706200 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 1373933-1383932 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124078638 5260 Chlorophyte Singleton cluster - no MSA
123396554 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.788       Low
cufflinks 2.632        
cufflinks 4.856       High
cufflinks 5.753       High
cufflinks 1.658        
cufflinks 2.216        
cufflinks 2.809        
cufflinks 4.825       High
cufflinks 0.551       Low
cufflinks 1.04       Low
cufflinks 5.038       High
cufflinks 2.989        
cufflinks 2.572        
cufflinks 2.163        
cufflinks 3.231        
cufflinks 1.131       Low
cufflinks 2.89        
cufflinks 3.173        
cufflinks 1.295       Low
cufflinks 4.426       High
cufflinks 2.469        
cufflinks 1.729        
cufflinks 3.674        
cufflinks 4.503       High
cufflinks 1.756        
cufflinks 0.66265 0.0 1.41702   High
cufflinks 2.86272 0.0 5.91299    
cufflinks 7.89277 0.0 16.3108    
cufflinks 1.30616 0.0 2.6659   High
cufflinks 2.68759 0.0133198 5.36186   Low

0 Strain