Gene : SRR17 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g706050 Defline:  (1 of 4) PTHR19331//PTHR19331:SF328 - LYSYL OXIDASE-RELATED // SUBFAMILY NOT NAMED
Genomic Order:  225 Name:  ? Cre17.g706050
Secondary Identifier:  ? PAC:30782197
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g706050 0.5kb upstream 0.5kb upstream 35656 true chromosome_17: 1332063-1367718 Chlamydomonas reinhardtii
Cre17.g706050 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 1367219-1367718 Chlamydomonas reinhardtii
Cre17.g706050 0.5kb downstream 0.5kb downstream 35656 true chromosome_17: 1331563-1367218 Chlamydomonas reinhardtii
Cre17.g706050 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 1331563-1332062 Chlamydomonas reinhardtii
Cre17.g706050 1.0kb upstream 1.0kb upstream 36156 true chromosome_17: 1332063-1368218 Chlamydomonas reinhardtii
Cre17.g706050 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 1367219-1368218 Chlamydomonas reinhardtii
Cre17.g706050 1.0kb downstream 1.0kb downstream 36156 true chromosome_17: 1331063-1367218 Chlamydomonas reinhardtii
Cre17.g706050 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 1331063-1332062 Chlamydomonas reinhardtii
Cre17.g706050 2.0kb upstream 2.0kb upstream 37156 true chromosome_17: 1332063-1369218 Chlamydomonas reinhardtii
Cre17.g706050 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 1367219-1369218 Chlamydomonas reinhardtii
Cre17.g706050 2.0kb downstream 2.0kb downstream 37156 true chromosome_17: 1330063-1367218 Chlamydomonas reinhardtii
Cre17.g706050 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 1330063-1332062 Chlamydomonas reinhardtii
Cre17.g706050 5.0kb upstream 5.0kb upstream 40156 true chromosome_17: 1332063-1372218 Chlamydomonas reinhardtii
Cre17.g706050 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 1367219-1372218 Chlamydomonas reinhardtii
Cre17.g706050 5.0kb downstream 5.0kb downstream 40156 true chromosome_17: 1327063-1367218 Chlamydomonas reinhardtii
Cre17.g706050 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 1327063-1332062 Chlamydomonas reinhardtii
Cre17.g706050 10.0kb upstream 10.0kb upstream 45156 true chromosome_17: 1332063-1377218 Chlamydomonas reinhardtii
Cre17.g706050 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 1367219-1377218 Chlamydomonas reinhardtii
Cre17.g706050 10.0kb downstream 10.0kb downstream 45156 true chromosome_17: 1322063-1367218 Chlamydomonas reinhardtii
Cre17.g706050 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 1322063-1332062 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124085826 5260 Chlorophyte View MSA
123403266 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.168       Low
cufflinks 0.329        
cufflinks 0.543        
cufflinks 0.685        
cufflinks 0.261        
cufflinks 0.277        
cufflinks 0.31        
cufflinks 0.745       High
cufflinks 0.218        
cufflinks 0.064       Low
cufflinks 0.816       High
cufflinks 0.665        
cufflinks 0.209        
cufflinks 0.215        
cufflinks 0.575        
cufflinks 0.206        
cufflinks 0.592        
cufflinks 0.483        
cufflinks 0.22        
cufflinks 0.533        
cufflinks 0.608        
cufflinks 0.496        
cufflinks 0.354        
cufflinks 0.826       High
cufflinks 0.717       High
cufflinks 2.19012 0.201453 4.17879    
cufflinks 2.94428 0.295379 5.59319    
cufflinks 1.88503 0.0 3.789    
cufflinks 2.3256 0.072015 4.57919   High
cufflinks 4.36839 0.0 8.93048    

0 Strain