Gene : LIC2 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g707200 Defline:  (1 of 4) PTHR18945//PTHR18945:SF222 - NEUROTRANSMITTER GATED ION CHANNEL // SUBFAMILY NOT NAMED
Genomic Order:  247 Name:  ? Cre17.g707200
Secondary Identifier:  ? PAC:30782018
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g707200 0.5kb upstream 0.5kb upstream 7580 true chromosome_17: 1516071-1523650 Chlamydomonas reinhardtii
Cre17.g707200 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 1516071-1516570 Chlamydomonas reinhardtii
Cre17.g707200 0.5kb downstream 0.5kb downstream 7580 true chromosome_17: 1516571-1524150 Chlamydomonas reinhardtii
Cre17.g707200 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 1523651-1524150 Chlamydomonas reinhardtii
Cre17.g707200 1.0kb upstream 1.0kb upstream 8080 true chromosome_17: 1515571-1523650 Chlamydomonas reinhardtii
Cre17.g707200 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 1515571-1516570 Chlamydomonas reinhardtii
Cre17.g707200 1.0kb downstream 1.0kb downstream 8080 true chromosome_17: 1516571-1524650 Chlamydomonas reinhardtii
Cre17.g707200 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 1523651-1524650 Chlamydomonas reinhardtii
Cre17.g707200 2.0kb upstream 2.0kb upstream 9080 true chromosome_17: 1514571-1523650 Chlamydomonas reinhardtii
Cre17.g707200 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 1514571-1516570 Chlamydomonas reinhardtii
Cre17.g707200 2.0kb downstream 2.0kb downstream 9080 true chromosome_17: 1516571-1525650 Chlamydomonas reinhardtii
Cre17.g707200 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 1523651-1525650 Chlamydomonas reinhardtii
Cre17.g707200 5.0kb upstream 5.0kb upstream 12080 true chromosome_17: 1511571-1523650 Chlamydomonas reinhardtii
Cre17.g707200 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 1511571-1516570 Chlamydomonas reinhardtii
Cre17.g707200 5.0kb downstream 5.0kb downstream 12080 true chromosome_17: 1516571-1528650 Chlamydomonas reinhardtii
Cre17.g707200 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 1523651-1528650 Chlamydomonas reinhardtii
Cre17.g707200 10.0kb upstream 10.0kb upstream 17080 true chromosome_17: 1506571-1523650 Chlamydomonas reinhardtii
Cre17.g707200 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 1506571-1516570 Chlamydomonas reinhardtii
Cre17.g707200 10.0kb downstream 10.0kb downstream 17080 true chromosome_17: 1516571-1533650 Chlamydomonas reinhardtii
Cre17.g707200 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 1523651-1533650 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124080361 5260 Chlorophyte View MSA
123398148 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.955       Low
cufflinks 2.052        
cufflinks 3.884       High
cufflinks 4.403       High
cufflinks 1.591        
cufflinks 1.65        
cufflinks 3.817       High
cufflinks 3.346        
cufflinks 1.117       Low
cufflinks 0.805       Low
cufflinks 5.667       High
cufflinks 3.203        
cufflinks 1.011       Low
cufflinks 1.718        
cufflinks 3.225        
cufflinks 0.977       Low
cufflinks 1.261        
cufflinks 2.383        
cufflinks 1.499        
cufflinks 4.159       High
cufflinks 2.551        
cufflinks 1.437        
cufflinks 3.595        
cufflinks 4.242       High
cufflinks 1.574        
cufflinks 2.08473 0.248914 3.92054   High
cufflinks 2.06485 0.126228 4.00348    
cufflinks 4.20986 0.0 8.67683    
cufflinks 3.2224 0.524717 5.92008   High
cufflinks 4.38926 0.803443 7.97508    

0 Strain