Gene : Cre17.g712400 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR30238:SF0 - PROTEIN PIGMENT DEFECTIVE 149 Genomic Order:  363
Name:  ? Cre17.g712400 Secondary Identifier:  ? PAC:30782380
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g712400 0.5kb upstream 0.5kb upstream 3328 true chromosome_17: 2112446-2115773 Chlamydomonas reinhardtii
Cre17.g712400 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 2112446-2112945 Chlamydomonas reinhardtii
Cre17.g712400 0.5kb downstream 0.5kb downstream 3328 true chromosome_17: 2112946-2116273 Chlamydomonas reinhardtii
Cre17.g712400 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 2115774-2116273 Chlamydomonas reinhardtii
Cre17.g712400 1.0kb upstream 1.0kb upstream 3828 true chromosome_17: 2111946-2115773 Chlamydomonas reinhardtii
Cre17.g712400 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 2111946-2112945 Chlamydomonas reinhardtii
Cre17.g712400 1.0kb downstream 1.0kb downstream 3828 true chromosome_17: 2112946-2116773 Chlamydomonas reinhardtii
Cre17.g712400 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 2115774-2116773 Chlamydomonas reinhardtii
Cre17.g712400 2.0kb upstream 2.0kb upstream 4828 true chromosome_17: 2110946-2115773 Chlamydomonas reinhardtii
Cre17.g712400 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 2110946-2112945 Chlamydomonas reinhardtii
Cre17.g712400 2.0kb downstream 2.0kb downstream 4828 true chromosome_17: 2112946-2117773 Chlamydomonas reinhardtii
Cre17.g712400 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 2115774-2117773 Chlamydomonas reinhardtii
Cre17.g712400 5.0kb upstream 5.0kb upstream 7828 true chromosome_17: 2107946-2115773 Chlamydomonas reinhardtii
Cre17.g712400 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 2107946-2112945 Chlamydomonas reinhardtii
Cre17.g712400 5.0kb downstream 5.0kb downstream 7828 true chromosome_17: 2112946-2120773 Chlamydomonas reinhardtii
Cre17.g712400 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 2115774-2120773 Chlamydomonas reinhardtii
Cre17.g712400 10.0kb upstream 10.0kb upstream 12828 true chromosome_17: 2102946-2115773 Chlamydomonas reinhardtii
Cre17.g712400 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 2102946-2112945 Chlamydomonas reinhardtii
Cre17.g712400 10.0kb downstream 10.0kb downstream 12828 true chromosome_17: 2112946-2125773 Chlamydomonas reinhardtii
Cre17.g712400 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 2115774-2125773 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111152 5260 Chlorophyte View MSA
123424964 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.496     High  
cufflinks 26.284     High  
cufflinks 29.598     High  
cufflinks 31.702     High  
cufflinks 24.71     High  
cufflinks 24.785     High  
cufflinks 22.079     High  
cufflinks 39.587     High  
cufflinks 23.453     High  
cufflinks 6.94     High Low
cufflinks 20.478     High  
cufflinks 35.656     High  
cufflinks 13.838     High Low
cufflinks 30.343     High  
cufflinks 25.003     High  
cufflinks 33.046     High  
cufflinks 39.618     High  
cufflinks 28.652     High  
cufflinks 8.178     High Low
cufflinks 54.653     High High
cufflinks 30.08     High  
cufflinks 31.916     High  
cufflinks 41.06     High  
cufflinks 39.899     High  
cufflinks 38.339     High  
cufflinks 86.3089 0.0 177.025 High  
cufflinks 21.6824 5.5643 37.8005    
cufflinks 21.2531 0.0 43.0759    
cufflinks 25.528 0.556393 50.4995 High  
cufflinks 22.3585 3.45984 41.2571   Low

0 Strain