Gene : Cre17.g716850 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR23327//PTHR23327:SF9 - RING FINGER PROTEIN 127 // ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEIN Genomic Order:  463
Name:  ? Cre17.g716850 Secondary Identifier:  ? PAC:30782717
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g716850 0.5kb upstream 0.5kb upstream 5342 true chromosome_17: 2588261-2593602 Chlamydomonas reinhardtii
Cre17.g716850 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 2588261-2588760 Chlamydomonas reinhardtii
Cre17.g716850 0.5kb downstream 0.5kb downstream 5342 true chromosome_17: 2588761-2594102 Chlamydomonas reinhardtii
Cre17.g716850 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 2593603-2594102 Chlamydomonas reinhardtii
Cre17.g716850 1.0kb upstream 1.0kb upstream 5842 true chromosome_17: 2587761-2593602 Chlamydomonas reinhardtii
Cre17.g716850 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 2587761-2588760 Chlamydomonas reinhardtii
Cre17.g716850 1.0kb downstream 1.0kb downstream 5842 true chromosome_17: 2588761-2594602 Chlamydomonas reinhardtii
Cre17.g716850 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 2593603-2594602 Chlamydomonas reinhardtii
Cre17.g716850 2.0kb upstream 2.0kb upstream 6842 true chromosome_17: 2586761-2593602 Chlamydomonas reinhardtii
Cre17.g716850 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 2586761-2588760 Chlamydomonas reinhardtii
Cre17.g716850 2.0kb downstream 2.0kb downstream 6842 true chromosome_17: 2588761-2595602 Chlamydomonas reinhardtii
Cre17.g716850 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 2593603-2595602 Chlamydomonas reinhardtii
Cre17.g716850 5.0kb upstream 5.0kb upstream 9842 true chromosome_17: 2583761-2593602 Chlamydomonas reinhardtii
Cre17.g716850 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 2583761-2588760 Chlamydomonas reinhardtii
Cre17.g716850 5.0kb downstream 5.0kb downstream 9842 true chromosome_17: 2588761-2598602 Chlamydomonas reinhardtii
Cre17.g716850 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 2593603-2598602 Chlamydomonas reinhardtii
Cre17.g716850 10.0kb upstream 10.0kb upstream 14842 true chromosome_17: 2578761-2593602 Chlamydomonas reinhardtii
Cre17.g716850 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 2578761-2588760 Chlamydomonas reinhardtii
Cre17.g716850 10.0kb downstream 10.0kb downstream 14842 true chromosome_17: 2588761-2603602 Chlamydomonas reinhardtii
Cre17.g716850 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 2593603-2603602 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111600 5260 Chlorophyte View MSA
123427898 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.499        
cufflinks 0.838        
cufflinks 0.601        
cufflinks 1.342        
cufflinks 0.786        
cufflinks 0.569        
cufflinks 0.992        
cufflinks 1.374        
cufflinks 0.691        
cufflinks 0.165       Low
cufflinks 1.172        
cufflinks 1.608        
cufflinks 0.181       Low
cufflinks 0.617        
cufflinks 1.119        
cufflinks 0.733        
cufflinks 2.454       High
cufflinks 0.782        
cufflinks 0.197       Low
cufflinks 1.447        
cufflinks 1.268        
cufflinks 1.91       High
cufflinks 0.549        
cufflinks 1.32        
cufflinks 2.557       High
cufflinks 2.5658 0.0523789 5.07921   Low
cufflinks 2.86077 0.0 6.52102   Low
cufflinks 7.24213 0.0 15.9275    
cufflinks 5.05121 0.523667 9.57874    
cufflinks 3.30309 0.0 6.67526   Low

0 Strain