Gene : EFP1 C. reinhardtii v5.6
Primary Identifier:  ? Cre16.g691000 Defline:  (1 of 1) K02356 - elongation factor P (efp)
Genomic Order:  122 Name:  ? Cre16.g691000
Secondary Identifier:  ? PAC:30777419
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g691000 0.5kb upstream 0.5kb upstream 4282 true chromosome_16: 746164-750445 Chlamydomonas reinhardtii
Cre16.g691000 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 746164-746663 Chlamydomonas reinhardtii
Cre16.g691000 0.5kb downstream 0.5kb downstream 4282 true chromosome_16: 746664-750945 Chlamydomonas reinhardtii
Cre16.g691000 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 750446-750945 Chlamydomonas reinhardtii
Cre16.g691000 1.0kb upstream 1.0kb upstream 4782 true chromosome_16: 745664-750445 Chlamydomonas reinhardtii
Cre16.g691000 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 745664-746663 Chlamydomonas reinhardtii
Cre16.g691000 1.0kb downstream 1.0kb downstream 4782 true chromosome_16: 746664-751445 Chlamydomonas reinhardtii
Cre16.g691000 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 750446-751445 Chlamydomonas reinhardtii
Cre16.g691000 2.0kb upstream 2.0kb upstream 5782 true chromosome_16: 744664-750445 Chlamydomonas reinhardtii
Cre16.g691000 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 744664-746663 Chlamydomonas reinhardtii
Cre16.g691000 2.0kb downstream 2.0kb downstream 5782 true chromosome_16: 746664-752445 Chlamydomonas reinhardtii
Cre16.g691000 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 750446-752445 Chlamydomonas reinhardtii
Cre16.g691000 5.0kb upstream 5.0kb upstream 8782 true chromosome_16: 741664-750445 Chlamydomonas reinhardtii
Cre16.g691000 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 741664-746663 Chlamydomonas reinhardtii
Cre16.g691000 5.0kb downstream 5.0kb downstream 8782 true chromosome_16: 746664-755445 Chlamydomonas reinhardtii
Cre16.g691000 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 750446-755445 Chlamydomonas reinhardtii
Cre16.g691000 10.0kb upstream 10.0kb upstream 13782 true chromosome_16: 736664-750445 Chlamydomonas reinhardtii
Cre16.g691000 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 736664-746663 Chlamydomonas reinhardtii
Cre16.g691000 10.0kb downstream 10.0kb downstream 13782 true chromosome_16: 746664-760445 Chlamydomonas reinhardtii
Cre16.g691000 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 750446-760445 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113242 5260 Chlorophyte View MSA
123424551 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 75.871     High High
cufflinks 65.055     High High
cufflinks 49.903     High  
cufflinks 48.02     High  
cufflinks 65.716     High High
cufflinks 63.284     High  
cufflinks 33.478     High Low
cufflinks 36.55     High  
cufflinks 78.144     High High
cufflinks 58.719     High  
cufflinks 36.211     High  
cufflinks 39.209     High  
cufflinks 35.227     High Low
cufflinks 64.564     High  
cufflinks 42.287     High  
cufflinks 87.557     High High
cufflinks 33.058     High Low
cufflinks 57.564     High  
cufflinks 40.407     High  
cufflinks 31.52     High Low
cufflinks 41.396     High  
cufflinks 38.812     High  
cufflinks 52.937     High  
cufflinks 36.861     High  
cufflinks 38.791     High  
cufflinks 120.607 0.0 246.78 High  
cufflinks 149.615 27.2802 271.949 High  
cufflinks 65.5141 0.0 134.596 High  
cufflinks 100.458 0.0 204.967 High Low
cufflinks 92.3431 7.35002 177.336 High Low

0 Strain